Protein–RNA interactions for Protein: P46669

RPA43, DNA-directed RNA polymerase I subunit RPA43, yeastyeast

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA43P46669 YLR154W-FYLR154W-F 141 nt-0.01□□□□□ -2.41
RPA43P46669 SNU13YEL026W 381 nt-0.04□□□□□ -2.42
RPA43P46669 YJL197C-AYJL197C-A 282 nt-0.04□□□□□ -2.42
RPA43P46669 YKU70YMR284W 1809 nt-0.04□□□□□ -2.42
RPA43P46669 YDR366CYDR366C 399 nt-0.05□□□□□ -2.42
RPA43P46669 YLL019W-AYLL019W-A 93 nt-0.05□□□□□ -2.42
RPA43P46669 YFL063WYFL063W 456 nt-0.07□□□□□ -2.42
RPA43P46669 YLR222C-AYLR222C-A 231 nt-0.07□□□□□ -2.42
RPA43P46669 YPR016W-AYPR016W-A 261 nt-0.07□□□□□ -2.42
RPA43P46669 YDR157WYDR157W 402 nt-0.08□□□□□ -2.42
RPA43P46669 YEL073CYEL073C 324 nt-0.08□□□□□ -2.42
RPA43P46669 YIL032CYIL032C 357 nt-0.08□□□□□ -2.42
RPA43P46669 YBR072C-AYBR072C-A 162 nt-0.09□□□□□ -2.42
RPA43P46669 YLR232WYLR232W 348 nt-0.1□□□□□ -2.43
RPA43P46669 YOR072W-BYOR072W-B 162 nt-0.1□□□□□ -2.43
RPA43P46669 YLR041WYLR041W 321 nt-0.11□□□□□ -2.43
RPA43P46669 CSE1YGL238W 2883 nt-0.11□□□□□ -2.43
RPA43P46669 YMR193C-AYMR193C-A 387 nt-0.13□□□□□ -2.43
RPA43P46669 HTL1YCR020W-B 237 nt-0.14□□□□□ -2.43
RPA43P46669 YER053C-AYER053C-A 114 nt-0.14□□□□□ -2.43
RPA43P46669 snR128snR128 126 nt-0.14□□□□□ -2.43
RPA43P46669 VAR1Q0140 1197 nt-0.15□□□□□ -2.43
RPA43P46669 YMR158W-BYMR158W-B 321 nt-0.15□□□□□ -2.43
RPA43P46669 YNL028WYNL028W 318 nt-0.15□□□□□ -2.43
RPA43P46669 YGL149WYGL149W 306 nt-0.16□□□□□ -2.44
RPA43P46669 YGR069WYGR069W 336 nt-0.16□□□□□ -2.44
RPA43P46669 YAF9YNL107W 681 nt-0.16□□□□□ -2.44
RPA43P46669 TFB5YDR079C-A 219 nt-0.18□□□□□ -2.44
RPA43P46669 Q0144Q0144 330 nt-0.18□□□□□ -2.44
RPA43P46669 YPL038W-AYPL038W-A 192 nt-0.18□□□□□ -2.44
RPA43P46669 YDR102CYDR102C 333 nt-0.19□□□□□ -2.44
RPA43P46669 SOV1YMR066W 2697 nt-0.19□□□□□ -2.44
RPA43P46669 snR8snR8 190 nt-0.2□□□□□ -2.44
RPA43P46669 snR36snR36 182 nt-0.2□□□□□ -2.44
RPA43P46669 YDR210WYDR210W 228 nt-0.21□□□□□ -2.44
RPA43P46669 GLG1YKR058W 1851 nt-0.22□□□□□ -2.44
RPA43P46669 YCR038W-AYCR038W-A 126 nt-0.23□□□□□ -2.45
RPA43P46669 TAH1YCR060W 336 nt-0.23□□□□□ -2.45
RPA43P46669 YBR099CYBR099C 384 nt-0.23□□□□□ -2.45
RPA43P46669 YPR170W-AYPR170W-A 186 nt-0.24□□□□□ -2.45
RPA43P46669 YDR183C-AYDR183C-A 258 nt-0.25□□□□□ -2.45
RPA43P46669 SDH6YDR379C-A 240 nt-0.25□□□□□ -2.45
RPA43P46669 YIL002W-AYIL002W-A 210 nt-0.25□□□□□ -2.45
RPA43P46669 YPR197CYPR197C 564 nt-0.25□□□□□ -2.45
RPA43P46669 YGR164WYGR164W 336 nt-0.26□□□□□ -2.45
RPA43P46669 APQ12YIL040W 417 nt-0.26□□□□□ -2.45
RPA43P46669 YOR015WYOR015W 360 nt-0.26□□□□□ -2.45
RPA43P46669 HMRA1YCR097W 381 nt-0.27□□□□□ -2.45
RPA43P46669 ATP6Q0085 780 nt-0.27□□□□□ -2.45
RPA43P46669 YLR120W-AYLR120W-A 102 nt-0.27□□□□□ -2.45
RPA43P46669 EST1YLR233C 2100 nt-0.28□□□□□ -2.45
RPA43P46669 YDR118W-AYDR118W-A 117 nt-0.29□□□□□ -2.46
RPA43P46669 YDR544CYDR544C 429 nt-0.29□□□□□ -2.46
RPA43P46669 SBH2YER019C-A 267 nt-0.29□□□□□ -2.46
RPA43P46669 snR74snR74 88 nt-0.3□□□□□ -2.46
RPA43P46669 RAD61YDR014W 1944 nt-0.3□□□□□ -2.46
RPA43P46669 YFL032WYFL032W 321 nt-0.31□□□□□ -2.46
RPA43P46669 YGL052WYGL052W 306 nt-0.34□□□□□ -2.46
RPA43P46669 snR46snR46 197 nt-0.35□□□□□ -2.47
RPA43P46669 YDL240C-AYDL240C-A 138 nt-0.37□□□□□ -2.47
RPA43P46669 YMR172C-AYMR172C-A 384 nt-0.37□□□□□ -2.47
RPA43P46669 YPR012WYPR012W 255 nt-0.37□□□□□ -2.47
RPA43P46669 COG6YNL041C 2520 nt-0.37□□□□□ -2.47
RPA43P46669 YDR413CYDR413C 576 nt-0.39□□□□□ -2.47
RPA43P46669 YFL019CYFL019C 354 nt-0.39□□□□□ -2.47
RPA43P46669 RPL39YJL189W 156 nt-0.4□□□□□ -2.47
RPA43P46669 YKL118WYKL118W 312 nt-0.41□□□□□ -2.48
RPA43P46669 YOR008C-AYOR008C-A 225 nt-0.41□□□□□ -2.48
RPA43P46669 SEC10YLR166C 2616 nt-0.43□□□□□ -2.48
RPA43P46669 YIR030W-AYIR030W-A 384 nt-0.45□□□□□ -2.48
RPA43P46669 YBL039C-AYBL039C-A 84 nt-0.45□□□□□ -2.48
RPA43P46669 YJL113WYJL113W 4647 nt-0.45□□□□□ -2.48
RPA43P46669 YER097WYER097W 330 nt-0.46□□□□□ -2.48
RPA43P46669 YGL041CYGL041C 204 nt-0.47□□□□□ -2.48
RPA43P46669 YBR182C-AYBR182C-A 195 nt-0.48□□□□□ -2.49
RPA43P46669 YOR314W-AYOR314W-A 111 nt-0.49□□□□□ -2.49
RPA43P46669 YML099W-AYML099W-A 330 nt-0.5□□□□□ -2.49
RPA43P46669 GIM4YEL003W 336 nt-0.51□□□□□ -2.49
RPA43P46669 YIL071W-AYIL071W-A 477 nt-0.51□□□□□ -2.49
RPA43P46669 YGL182CYGL182C 324 nt-0.52□□□□□ -2.49
RPA43P46669 URB1YKL014C 5295 nt-0.54□□□□□ -2.5
RPA43P46669 YNL277W-AYNL277W-A 189 nt-0.55□□□□□ -2.5
RPA43P46669 RPM2YML091C 3609 nt-0.57□□□□□ -2.5
RPA43P46669 tQ(UUG)QtQ(UUG)Q 76 nt-0.58□□□□□ -2.5
RPA43P46669 YJL077W-AYJL077W-A 87 nt-0.58□□□□□ -2.5
RPA43P46669 snR55snR55 98 nt-0.59□□□□□ -2.5
RPA43P46669 tF(GAA)QtF(GAA)Q 75 nt-0.59□□□□□ -2.5
RPA43P46669 YPR010C-AYPR010C-A 219 nt-0.59□□□□□ -2.5
RPA43P46669 YBR131C-AYBR131C-A 90 nt-0.59□□□□□ -2.5
RPA43P46669 YEL014CYEL014C 306 nt-0.6□□□□□ -2.51
RPA43P46669 PAU9YBL108C-A 129 nt-0.6□□□□□ -2.51
RPA43P46669 YER181CYER181C 324 nt-0.62□□□□□ -2.51
RPA43P46669 tM(CAU)Q2tM(CAU)Q2 78 nt-0.62□□□□□ -2.51
RPA43P46669 YML100W-AYML100W-A 174 nt-0.63□□□□□ -2.51
RPA43P46669 YOR381W-AYOR381W-A 168 nt-0.63□□□□□ -2.51
RPA43P46669 YDL007C-AYDL007C-A 258 nt-0.64□□□□□ -2.51
RPA43P46669 YHR175W-AYHR175W-A 150 nt-0.64□□□□□ -2.51
RPA43P46669 YJL182CYJL182C 318 nt-0.64□□□□□ -2.51
RPA43P46669 snR49snR49 165 nt-0.65□□□□□ -2.51
RPA43P46669 YNL067W-BYNL067W-B 141 nt-0.67□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 49.4 ms