Protein–RNA interactions for Protein: P43609

RSC8, Chromatin structure-remodeling complex protein RSC8, yeastyeast

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC8P43609 snR48snR48 113 nt1.49□□□□□ -2.17
RSC8P43609 UTP8YGR128C 2142 nt1.49□□□□□ -2.17
RSC8P43609 BFR2YDR299W 1605 nt1.48□□□□□ -2.17
RSC8P43609 YLL020CYLL020C 306 nt1.48□□□□□ -2.17
RSC8P43609 NOP9YJL010C 2001 nt1.48□□□□□ -2.17
RSC8P43609 TRM732YMR259C 4263 nt1.47□□□□□ -2.17
RSC8P43609 QCR9YGR183C 201 nt1.47□□□□□ -2.17
RSC8P43609 YLR282CYLR282C 342 nt1.47□□□□□ -2.17
RSC8P43609 YFR012W-AYFR012W-A 87 nt1.45□□□□□ -2.18
RSC8P43609 YGL182CYGL182C 324 nt1.45□□□□□ -2.18
RSC8P43609 RAD9YDR217C 3930 nt1.44□□□□□ -2.18
RSC8P43609 tV(UAC)BtV(UAC)B 74 nt1.44□□□□□ -2.18
RSC8P43609 tV(UAC)DtV(UAC)D 74 nt1.44□□□□□ -2.18
RSC8P43609 GEA2YEL022W 4380 nt1.44□□□□□ -2.18
RSC8P43609 YML002WYML002W 2214 nt1.44□□□□□ -2.18
RSC8P43609 tL(UAA)QtL(UAA)Q 85 nt1.43□□□□□ -2.18
RSC8P43609 ROM2YLR371W 4071 nt1.43□□□□□ -2.18
RSC8P43609 RPL26BYGR034W 384 nt1.42□□□□□ -2.18
RSC8P43609 YNL205CYNL205C 423 nt1.41□□□□□ -2.18
RSC8P43609 CHS6YJL099W 2241 nt1.4□□□□□ -2.18
RSC8P43609 YBL039C-AYBL039C-A 84 nt1.4□□□□□ -2.19
RSC8P43609 NUP157YER105C 4176 nt1.39□□□□□ -2.19
RSC8P43609 snR85snR85 171 nt1.39□□□□□ -2.19
RSC8P43609 snR190snR190 190 nt1.39□□□□□ -2.19
RSC8P43609 CDC25YLR310C 4770 nt1.39□□□□□ -2.19
RSC8P43609 tF(GAA)BtF(GAA)B 73 nt1.38□□□□□ -2.19
RSC8P43609 tF(GAA)FtF(GAA)F 73 nt1.38□□□□□ -2.19
RSC8P43609 tF(GAA)GtF(GAA)G 73 nt1.38□□□□□ -2.19
RSC8P43609 tF(GAA)H1tF(GAA)H1 73 nt1.38□□□□□ -2.19
RSC8P43609 tF(GAA)H2tF(GAA)H2 73 nt1.38□□□□□ -2.19
RSC8P43609 tF(GAA)MtF(GAA)M 73 nt1.38□□□□□ -2.19
RSC8P43609 tF(GAA)P1tF(GAA)P1 73 nt1.38□□□□□ -2.19
RSC8P43609 tF(GAA)P2tF(GAA)P2 73 nt1.38□□□□□ -2.19
RSC8P43609 YCL001W-BYCL001W-B 255 nt1.38□□□□□ -2.19
RSC8P43609 UBP3YER151C 2739 nt1.38□□□□□ -2.19
RSC8P43609 ASE1YOR058C 2658 nt1.37□□□□□ -2.19
RSC8P43609 TAH1YCR060W 336 nt1.37□□□□□ -2.19
RSC8P43609 YLR041WYLR041W 321 nt1.37□□□□□ -2.19
RSC8P43609 FYV10YIL097W 1551 nt1.37□□□□□ -2.19
RSC8P43609 NST1YNL091W 3723 nt1.36□□□□□ -2.19
RSC8P43609 STB6YKL072W 2301 nt1.35□□□□□ -2.19
RSC8P43609 DOP1YDR141C 5097 nt1.35□□□□□ -2.19
RSC8P43609 YOR329W-AYOR329W-A 210 nt1.34□□□□□ -2.19
RSC8P43609 SIP4YJL089W 2490 nt1.34□□□□□ -2.2
RSC8P43609 UTP20YBL004W 7482 nt1.34□□□□□ -2.2
RSC8P43609 CDC39YCR093W 6327 nt1.33□□□□□ -2.2
RSC8P43609 YLR232WYLR232W 348 nt1.3□□□□□ -2.2
RSC8P43609 YNL067W-BYNL067W-B 141 nt1.29□□□□□ -2.2
RSC8P43609 SEC8YPR055W 3198 nt1.29□□□□□ -2.2
RSC8P43609 SCC2YDR180W 4482 nt1.29□□□□□ -2.2
RSC8P43609 OST4YDL232W 111 nt1.27□□□□□ -2.21
RSC8P43609 KAP120YPL125W 3099 nt1.26□□□□□ -2.21
RSC8P43609 tM(CAU)Q2tM(CAU)Q2 78 nt1.25□□□□□ -2.21
RSC8P43609 VAM6YDL077C 3150 nt1.24□□□□□ -2.21
RSC8P43609 YCR095W-AYCR095W-A 159 nt1.24□□□□□ -2.21
RSC8P43609 YDR544CYDR544C 429 nt1.24□□□□□ -2.21
RSC8P43609 YHR131W-AYHR131W-A 246 nt1.24□□□□□ -2.21
RSC8P43609 YLR399W-AYLR399W-A 105 nt1.24□□□□□ -2.21
RSC8P43609 snR39BsnR39B 96 nt1.24□□□□□ -2.21
RSC8P43609 PRP16YKR086W 3216 nt1.24□□□□□ -2.21
RSC8P43609 SOM1YEL059C-A 225 nt1.23□□□□□ -2.21
RSC8P43609 YIL071W-AYIL071W-A 477 nt1.23□□□□□ -2.21
RSC8P43609 YBR099CYBR099C 384 nt1.23□□□□□ -2.21
RSC8P43609 YPR160W-AYPR160W-A 81 nt1.22□□□□□ -2.21
RSC8P43609 tN(GUU)QtN(GUU)Q 71 nt1.19□□□□□ -2.22
RSC8P43609 YOL014WYOL014W 375 nt1.19□□□□□ -2.22
RSC8P43609 YJR029WYJR029W 5268 nt1.18□□□□□ -2.22
RSC8P43609 YPR137C-BYPR137C-B 5268 nt1.18□□□□□ -2.22
RSC8P43609 BEM3YPL115C 3387 nt1.18□□□□□ -2.22
RSC8P43609 SPT7YBR081C 3999 nt1.16□□□□□ -2.22
RSC8P43609 COG6YNL041C 2520 nt1.16□□□□□ -2.22
RSC8P43609 EMT1tM(CAU)D 73 nt1.15□□□□□ -2.23
RSC8P43609 EMT5tM(CAU)J1 73 nt1.15□□□□□ -2.23
RSC8P43609 EMT3tM(CAU)J2 73 nt1.15□□□□□ -2.23
RSC8P43609 EMT4tM(CAU)M 73 nt1.15□□□□□ -2.23
RSC8P43609 EMT2tM(CAU)O2 73 nt1.15□□□□□ -2.23
RSC8P43609 BUD3YCL014W 4911 nt1.15□□□□□ -2.23
RSC8P43609 BEM2YER155C 6504 nt1.15□□□□□ -2.23
RSC8P43609 YDL073WYDL073W 2955 nt1.15□□□□□ -2.23
RSC8P43609 RPM2YML091C 3609 nt1.15□□□□□ -2.23
RSC8P43609 YSP1YHR155W 3687 nt1.14□□□□□ -2.23
RSC8P43609 YDR210WYDR210W 228 nt1.14□□□□□ -2.23
RSC8P43609 YJL127W-AYJL127W-A 117 nt1.14□□□□□ -2.23
RSC8P43609 PMP2YEL017C-A 132 nt1.13□□□□□ -2.23
RSC8P43609 BIR1YJR089W 2865 nt1.12□□□□□ -2.23
RSC8P43609 SEC1YDR164C 2175 nt1.1□□□□□ -2.23
RSC8P43609 YGR146C-AYGR146C-A 162 nt1.09□□□□□ -2.23
RSC8P43609 YIL142C-AYIL142C-A 333 nt1.08□□□□□ -2.24
RSC8P43609 YNL103W-AYNL103W-A 90 nt1.06□□□□□ -2.24
RSC8P43609 YBR072C-AYBR072C-A 162 nt1.06□□□□□ -2.24
RSC8P43609 YMR160WYMR160W 2451 nt1.06□□□□□ -2.24
RSC8P43609 GLG1YKR058W 1851 nt1.03□□□□□ -2.24
RSC8P43609 ULP2YIL031W 3105 nt1.03□□□□□ -2.24
RSC8P43609 TFB5YDR079C-A 219 nt1.03□□□□□ -2.24
RSC8P43609 YPR117WYPR117W 7470 nt1.03□□□□□ -2.24
RSC8P43609 snR61snR61 90 nt1.02□□□□□ -2.25
RSC8P43609 YDR524C-AYDR524C-A 120 nt1□□□□□ -2.25
RSC8P43609 YKL145W-AYKL145W-A 93 nt1□□□□□ -2.25
RSC8P43609 RKR1YMR247C 4689 nt1□□□□□ -2.25
RSC8P43609 YBL109WYBL109W 336 nt0.99□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 28 ms