Protein–RNA interactions for Protein: P42940

CIR1, Probable electron transfer flavoprotein subunit beta, yeastyeast

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIR1P42940 SCC2YDR180W 4482 nt1.29□□□□□ -2.2
CIR1P42940 IML1YJR138W 4755 nt1.29□□□□□ -2.2
CIR1P42940 YGR130CYGR130C 2451 nt1.28□□□□□ -2.2
CIR1P42940 PRP5YBR237W 2550 nt1.28□□□□□ -2.2
CIR1P42940 tV(UAC)BtV(UAC)B 74 nt1.28□□□□□ -2.2
CIR1P42940 tV(UAC)DtV(UAC)D 74 nt1.28□□□□□ -2.2
CIR1P42940 YLR282CYLR282C 342 nt1.28□□□□□ -2.2
CIR1P42940 BFR2YDR299W 1605 nt1.27□□□□□ -2.21
CIR1P42940 COX5BYIL111W 456 nt1.26□□□□□ -2.21
CIR1P42940 NST1YNL091W 3723 nt1.26□□□□□ -2.21
CIR1P42940 SPT7YBR081C 3999 nt1.25□□□□□ -2.21
CIR1P42940 YHL015W-AYHL015W-A 84 nt1.25□□□□□ -2.21
CIR1P42940 SIP4YJL089W 2490 nt1.24□□□□□ -2.21
CIR1P42940 YOR102WYOR102W 351 nt1.24□□□□□ -2.21
CIR1P42940 YPR117WYPR117W 7470 nt1.23□□□□□ -2.21
CIR1P42940 YGL182CYGL182C 324 nt1.22□□□□□ -2.21
CIR1P42940 snR190snR190 190 nt1.22□□□□□ -2.21
CIR1P42940 tL(UAA)QtL(UAA)Q 85 nt1.21□□□□□ -2.22
CIR1P42940 snR48snR48 113 nt1.21□□□□□ -2.22
CIR1P42940 YML002WYML002W 2214 nt1.21□□□□□ -2.22
CIR1P42940 UTP8YGR128C 2142 nt1.21□□□□□ -2.22
CIR1P42940 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
CIR1P42940 RPL26BYGR034W 384 nt1.2□□□□□ -2.22
CIR1P42940 YKL100W-AYKL100W-A 90 nt1.2□□□□□ -2.22
CIR1P42940 YLR041WYLR041W 321 nt1.2□□□□□ -2.22
CIR1P42940 YBL039C-AYBL039C-A 84 nt1.2□□□□□ -2.22
CIR1P42940 FYV10YIL097W 1551 nt1.19□□□□□ -2.22
CIR1P42940 TAH1YCR060W 336 nt1.18□□□□□ -2.22
CIR1P42940 SNU13YEL026W 381 nt1.18□□□□□ -2.22
CIR1P42940 YOR314W-AYOR314W-A 111 nt1.16□□□□□ -2.22
CIR1P42940 KAP120YPL125W 3099 nt1.16□□□□□ -2.22
CIR1P42940 YJR029WYJR029W 5268 nt1.16□□□□□ -2.22
CIR1P42940 YPR137C-BYPR137C-B 5268 nt1.16□□□□□ -2.22
CIR1P42940 BUD3YCL014W 4911 nt1.13□□□□□ -2.23
CIR1P42940 CHS6YJL099W 2241 nt1.12□□□□□ -2.23
CIR1P42940 YOR329W-AYOR329W-A 210 nt1.12□□□□□ -2.23
CIR1P42940 tN(GUU)QtN(GUU)Q 71 nt1.1□□□□□ -2.23
CIR1P42940 YDR544CYDR544C 429 nt1.09□□□□□ -2.23
CIR1P42940 snR39BsnR39B 96 nt1.09□□□□□ -2.23
CIR1P42940 SEC8YPR055W 3198 nt1.08□□□□□ -2.24
CIR1P42940 YLR232WYLR232W 348 nt1.08□□□□□ -2.24
CIR1P42940 YPR160W-AYPR160W-A 81 nt1.08□□□□□ -2.24
CIR1P42940 YCL001W-BYCL001W-B 255 nt1.08□□□□□ -2.24
CIR1P42940 PRP16YKR086W 3216 nt1.08□□□□□ -2.24
CIR1P42940 YDL073WYDL073W 2955 nt1.07□□□□□ -2.24
CIR1P42940 QCR9YGR183C 201 nt1.06□□□□□ -2.24
CIR1P42940 EMT1tM(CAU)D 73 nt1.05□□□□□ -2.24
CIR1P42940 EMT5tM(CAU)J1 73 nt1.05□□□□□ -2.24
CIR1P42940 EMT3tM(CAU)J2 73 nt1.05□□□□□ -2.24
CIR1P42940 EMT4tM(CAU)M 73 nt1.05□□□□□ -2.24
CIR1P42940 EMT2tM(CAU)O2 73 nt1.05□□□□□ -2.24
CIR1P42940 Q0143Q0143 153 nt1.05□□□□□ -2.24
CIR1P42940 YHR131W-AYHR131W-A 246 nt1.05□□□□□ -2.24
CIR1P42940 PAU24YBR301W 363 nt1.05□□□□□ -2.24
CIR1P42940 RKR1YMR247C 4689 nt1.04□□□□□ -2.24
CIR1P42940 YLR399W-AYLR399W-A 105 nt1.04□□□□□ -2.24
CIR1P42940 MYO1YHR023W 5787 nt1.04□□□□□ -2.24
CIR1P42940 YIL071W-AYIL071W-A 477 nt1.03□□□□□ -2.24
CIR1P42940 YNL067W-BYNL067W-B 141 nt1.02□□□□□ -2.25
CIR1P42940 SEC1YDR164C 2175 nt0.98□□□□□ -2.25
CIR1P42940 OST4YDL232W 111 nt0.98□□□□□ -2.25
CIR1P42940 COG6YNL041C 2520 nt0.98□□□□□ -2.25
CIR1P42940 YDR210WYDR210W 228 nt0.97□□□□□ -2.25
CIR1P42940 tM(CAU)Q2tM(CAU)Q2 78 nt0.97□□□□□ -2.25
CIR1P42940 YNL205CYNL205C 423 nt0.94□□□□□ -2.26
CIR1P42940 BEM3YPL115C 3387 nt0.94□□□□□ -2.26
CIR1P42940 YCR095W-AYCR095W-A 159 nt0.93□□□□□ -2.26
CIR1P42940 SOM1YEL059C-A 225 nt0.93□□□□□ -2.26
CIR1P42940 UBP3YER151C 2739 nt0.93□□□□□ -2.26
CIR1P42940 snR85snR85 171 nt0.92□□□□□ -2.26
CIR1P42940 YSP1YHR155W 3687 nt0.92□□□□□ -2.26
CIR1P42940 YJL127W-AYJL127W-A 117 nt0.9□□□□□ -2.27
CIR1P42940 YBR099CYBR099C 384 nt0.9□□□□□ -2.27
CIR1P42940 YBR072C-AYBR072C-A 162 nt0.89□□□□□ -2.27
CIR1P42940 YGR146C-AYGR146C-A 162 nt0.85□□□□□ -2.27
CIR1P42940 YOR192C-BYOR192C-B 5313 nt0.84□□□□□ -2.27
CIR1P42940 NNF2YGR089W 2811 nt0.84□□□□□ -2.28
CIR1P42940 YLL006W-AYLL006W-A 177 nt0.83□□□□□ -2.28
CIR1P42940 GLG1YKR058W 1851 nt0.83□□□□□ -2.28
CIR1P42940 RCO1YMR075W 2055 nt0.83□□□□□ -2.28
CIR1P42940 ULP2YIL031W 3105 nt0.82□□□□□ -2.28
CIR1P42940 PMP2YEL017C-A 132 nt0.81□□□□□ -2.28
CIR1P42940 STF2YGR008C 255 nt0.81□□□□□ -2.28
CIR1P42940 YIL142C-AYIL142C-A 333 nt0.81□□□□□ -2.28
CIR1P42940 tT(AGU)BtT(AGU)B 73 nt0.8□□□□□ -2.28
CIR1P42940 tT(AGU)CtT(AGU)C 73 nt0.8□□□□□ -2.28
CIR1P42940 tT(AGU)DtT(AGU)D 73 nt0.8□□□□□ -2.28
CIR1P42940 tT(AGU)HtT(AGU)H 73 nt0.8□□□□□ -2.28
CIR1P42940 tT(AGU)I1tT(AGU)I1 73 nt0.8□□□□□ -2.28
CIR1P42940 tT(AGU)I2tT(AGU)I2 73 nt0.8□□□□□ -2.28
CIR1P42940 tT(AGU)JtT(AGU)J 73 nt0.8□□□□□ -2.28
CIR1P42940 tT(AGU)N1tT(AGU)N1 73 nt0.8□□□□□ -2.28
CIR1P42940 tT(AGU)N2tT(AGU)N2 73 nt0.8□□□□□ -2.28
CIR1P42940 tT(AGU)O1tT(AGU)O1 73 nt0.8□□□□□ -2.28
CIR1P42940 tT(AGU)O2tT(AGU)O2 73 nt0.8□□□□□ -2.28
CIR1P42940 YNL103W-AYNL103W-A 90 nt0.8□□□□□ -2.28
CIR1P42940 BIR1YJR089W 2865 nt0.79□□□□□ -2.28
CIR1P42940 BUL2YML111W 2763 nt0.78□□□□□ -2.28
CIR1P42940 LTE1YAL024C 4308 nt0.78□□□□□ -2.28
CIR1P42940 RPM2YML091C 3609 nt0.77□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 33.7 ms