Protein–RNA interactions for Protein: P40453

UBP7, Ubiquitin carboxyl-terminal hydrolase 7, yeastyeast

Predictions only

Length 1,071 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP7P40453 STB6YKL072W 2301 nt1.32□□□□□ -2.2
UBP7P40453 UTP8YGR128C 2142 nt1.32□□□□□ -2.2
UBP7P40453 CDC39YCR093W 6327 nt1.31□□□□□ -2.2
UBP7P40453 HAL9YOL089C 3093 nt1.3□□□□□ -2.2
UBP7P40453 YER053C-AYER053C-A 114 nt1.3□□□□□ -2.2
UBP7P40453 YGL123C-AYGL123C-A 231 nt1.3□□□□□ -2.2
UBP7P40453 YIL134C-AYIL134C-A 204 nt1.3□□□□□ -2.2
UBP7P40453 CMC4YMR194C-B 222 nt1.3□□□□□ -2.2
UBP7P40453 YCL001W-BYCL001W-B 255 nt1.3□□□□□ -2.2
UBP7P40453 YIL002W-AYIL002W-A 210 nt1.29□□□□□ -2.2
UBP7P40453 YPL044CYPL044C 549 nt1.29□□□□□ -2.2
UBP7P40453 PRP5YBR237W 2550 nt1.28□□□□□ -2.2
UBP7P40453 NOP9YJL010C 2001 nt1.27□□□□□ -2.21
UBP7P40453 IML1YJR138W 4755 nt1.27□□□□□ -2.21
UBP7P40453 YNL103W-AYNL103W-A 90 nt1.27□□□□□ -2.21
UBP7P40453 RPL26BYGR034W 384 nt1.26□□□□□ -2.21
UBP7P40453 YHL015W-AYHL015W-A 84 nt1.25□□□□□ -2.21
UBP7P40453 tV(UAC)BtV(UAC)B 74 nt1.25□□□□□ -2.21
UBP7P40453 tV(UAC)DtV(UAC)D 74 nt1.25□□□□□ -2.21
UBP7P40453 TFB5YDR079C-A 219 nt1.24□□□□□ -2.21
UBP7P40453 YML002WYML002W 2214 nt1.24□□□□□ -2.21
UBP7P40453 RAD9YDR217C 3930 nt1.23□□□□□ -2.21
UBP7P40453 COX5BYIL111W 456 nt1.23□□□□□ -2.21
UBP7P40453 YLR282CYLR282C 342 nt1.23□□□□□ -2.21
UBP7P40453 YOR161W-AYOR161W-A 81 nt1.22□□□□□ -2.21
UBP7P40453 KAP120YPL125W 3099 nt1.21□□□□□ -2.22
UBP7P40453 tL(UAA)QtL(UAA)Q 85 nt1.21□□□□□ -2.22
UBP7P40453 PRP16YKR086W 3216 nt1.21□□□□□ -2.22
UBP7P40453 PMP2YEL017C-A 132 nt1.2□□□□□ -2.22
UBP7P40453 YOR102WYOR102W 351 nt1.2□□□□□ -2.22
UBP7P40453 YDR544CYDR544C 429 nt1.19□□□□□ -2.22
UBP7P40453 SIP4YJL089W 2490 nt1.19□□□□□ -2.22
UBP7P40453 snR190snR190 190 nt1.19□□□□□ -2.22
UBP7P40453 SNU13YEL026W 381 nt1.18□□□□□ -2.22
UBP7P40453 YFR012W-AYFR012W-A 87 nt1.18□□□□□ -2.22
UBP7P40453 PAU12YGR294W 363 nt1.18□□□□□ -2.22
UBP7P40453 YBR099CYBR099C 384 nt1.18□□□□□ -2.22
UBP7P40453 PAU24YBR301W 363 nt1.18□□□□□ -2.22
UBP7P40453 BFR2YDR299W 1605 nt1.18□□□□□ -2.22
UBP7P40453 YJR029WYJR029W 5268 nt1.15□□□□□ -2.22
UBP7P40453 YPR137C-BYPR137C-B 5268 nt1.15□□□□□ -2.22
UBP7P40453 FYV10YIL097W 1551 nt1.15□□□□□ -2.23
UBP7P40453 YDL073WYDL073W 2955 nt1.14□□□□□ -2.23
UBP7P40453 YOR314W-AYOR314W-A 111 nt1.14□□□□□ -2.23
UBP7P40453 RCO1YMR075W 2055 nt1.14□□□□□ -2.23
UBP7P40453 YGL182CYGL182C 324 nt1.13□□□□□ -2.23
UBP7P40453 SEC8YPR055W 3198 nt1.12□□□□□ -2.23
UBP7P40453 TAH1YCR060W 336 nt1.12□□□□□ -2.23
UBP7P40453 YCR095W-AYCR095W-A 159 nt1.12□□□□□ -2.23
UBP7P40453 ASE1YOR058C 2658 nt1.12□□□□□ -2.23
UBP7P40453 BEM3YPL115C 3387 nt1.11□□□□□ -2.23
UBP7P40453 YMR326CYMR326C 309 nt1.11□□□□□ -2.23
UBP7P40453 snR39BsnR39B 96 nt1.11□□□□□ -2.23
UBP7P40453 CHS6YJL099W 2241 nt1.1□□□□□ -2.23
UBP7P40453 YHR217CYHR217C 462 nt1.1□□□□□ -2.23
UBP7P40453 YLR232WYLR232W 348 nt1.1□□□□□ -2.23
UBP7P40453 YHR131W-AYHR131W-A 246 nt1.08□□□□□ -2.24
UBP7P40453 YBL039C-AYBL039C-A 84 nt1.08□□□□□ -2.24
UBP7P40453 SPT7YBR081C 3999 nt1.07□□□□□ -2.24
UBP7P40453 EMT1tM(CAU)D 73 nt1.07□□□□□ -2.24
UBP7P40453 EMT5tM(CAU)J1 73 nt1.07□□□□□ -2.24
UBP7P40453 EMT3tM(CAU)J2 73 nt1.07□□□□□ -2.24
UBP7P40453 EMT4tM(CAU)M 73 nt1.07□□□□□ -2.24
UBP7P40453 EMT2tM(CAU)O2 73 nt1.07□□□□□ -2.24
UBP7P40453 YLR399W-AYLR399W-A 105 nt1.07□□□□□ -2.24
UBP7P40453 YOR192C-BYOR192C-B 5313 nt1.07□□□□□ -2.24
UBP7P40453 YGL041C-BYGL041C-B 183 nt1.06□□□□□ -2.24
UBP7P40453 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
UBP7P40453 DOP1YDR141C 5097 nt1.06□□□□□ -2.24
UBP7P40453 OST4YDL232W 111 nt1.05□□□□□ -2.24
UBP7P40453 YLR041WYLR041W 321 nt1.05□□□□□ -2.24
UBP7P40453 YNL067W-BYNL067W-B 141 nt1.05□□□□□ -2.24
UBP7P40453 QCR9YGR183C 201 nt1.04□□□□□ -2.24
UBP7P40453 SCC2YDR180W 4482 nt1.03□□□□□ -2.24
UBP7P40453 snR61snR61 90 nt1.03□□□□□ -2.24
UBP7P40453 tM(CAU)Q2tM(CAU)Q2 78 nt1.03□□□□□ -2.24
UBP7P40453 UBP3YER151C 2739 nt1.03□□□□□ -2.24
UBP7P40453 COG6YNL041C 2520 nt1.03□□□□□ -2.25
UBP7P40453 BEM2YER155C 6504 nt1.02□□□□□ -2.25
UBP7P40453 YIL142C-AYIL142C-A 333 nt1.01□□□□□ -2.25
UBP7P40453 YPR160W-AYPR160W-A 81 nt1.01□□□□□ -2.25
UBP7P40453 YDL247W-AYDL247W-A 75 nt1□□□□□ -2.25
UBP7P40453 snR45snR45 172 nt1□□□□□ -2.25
UBP7P40453 RKR1YMR247C 4689 nt1□□□□□ -2.25
UBP7P40453 SOM1YEL059C-A 225 nt0.99□□□□□ -2.25
UBP7P40453 tS(GCU)Q1tS(GCU)Q1 86 nt0.99□□□□□ -2.25
UBP7P40453 tF(GAA)BtF(GAA)B 73 nt0.98□□□□□ -2.25
UBP7P40453 tF(GAA)FtF(GAA)F 73 nt0.98□□□□□ -2.25
UBP7P40453 tF(GAA)GtF(GAA)G 73 nt0.98□□□□□ -2.25
UBP7P40453 tF(GAA)H1tF(GAA)H1 73 nt0.98□□□□□ -2.25
UBP7P40453 tF(GAA)H2tF(GAA)H2 73 nt0.98□□□□□ -2.25
UBP7P40453 tF(GAA)MtF(GAA)M 73 nt0.98□□□□□ -2.25
UBP7P40453 tF(GAA)P1tF(GAA)P1 73 nt0.98□□□□□ -2.25
UBP7P40453 tF(GAA)P2tF(GAA)P2 73 nt0.98□□□□□ -2.25
UBP7P40453 snR81snR81 201 nt0.97□□□□□ -2.25
UBP7P40453 YLL066W-BYLL066W-B 171 nt0.97□□□□□ -2.25
UBP7P40453 YSP1YHR155W 3687 nt0.96□□□□□ -2.26
UBP7P40453 YDR210WYDR210W 228 nt0.96□□□□□ -2.26
UBP7P40453 tN(GUU)QtN(GUU)Q 71 nt0.96□□□□□ -2.26
UBP7P40453 YPR117WYPR117W 7470 nt0.96□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 68.4 ms