Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 SPG3YDR504C 384 nt0.98□□□□□ -2.25
VPS27P40343 CHS6YJL099W 2241 nt0.97□□□□□ -2.25
VPS27P40343 YML002WYML002W 2214 nt0.97□□□□□ -2.25
VPS27P40343 UBP3YER151C 2739 nt0.97□□□□□ -2.25
VPS27P40343 FYV10YIL097W 1551 nt0.97□□□□□ -2.25
VPS27P40343 YER053C-AYER053C-A 114 nt0.97□□□□□ -2.25
VPS27P40343 YCR038W-AYCR038W-A 126 nt0.95□□□□□ -2.26
VPS27P40343 OST4YDL232W 111 nt0.92□□□□□ -2.26
VPS27P40343 YMR046W-AYMR046W-A 129 nt0.92□□□□□ -2.26
VPS27P40343 tN(GUU)QtN(GUU)Q 71 nt0.91□□□□□ -2.26
VPS27P40343 tT(AGU)BtT(AGU)B 73 nt0.91□□□□□ -2.26
VPS27P40343 tT(AGU)CtT(AGU)C 73 nt0.91□□□□□ -2.26
VPS27P40343 tT(AGU)DtT(AGU)D 73 nt0.91□□□□□ -2.26
VPS27P40343 tT(AGU)HtT(AGU)H 73 nt0.91□□□□□ -2.26
VPS27P40343 tT(AGU)I1tT(AGU)I1 73 nt0.91□□□□□ -2.26
VPS27P40343 tT(AGU)I2tT(AGU)I2 73 nt0.91□□□□□ -2.26
VPS27P40343 tT(AGU)JtT(AGU)J 73 nt0.91□□□□□ -2.26
VPS27P40343 tT(AGU)N1tT(AGU)N1 73 nt0.91□□□□□ -2.26
VPS27P40343 tT(AGU)N2tT(AGU)N2 73 nt0.91□□□□□ -2.26
VPS27P40343 tT(AGU)O1tT(AGU)O1 73 nt0.91□□□□□ -2.26
VPS27P40343 tT(AGU)O2tT(AGU)O2 73 nt0.91□□□□□ -2.26
VPS27P40343 JLP2YMR132C 627 nt0.91□□□□□ -2.26
VPS27P40343 snR46snR46 197 nt0.91□□□□□ -2.26
VPS27P40343 BEM3YPL115C 3387 nt0.9□□□□□ -2.26
VPS27P40343 SEC1YDR164C 2175 nt0.9□□□□□ -2.26
VPS27P40343 PAM16YJL104W 450 nt0.9□□□□□ -2.27
VPS27P40343 YSP1YHR155W 3687 nt0.9□□□□□ -2.27
VPS27P40343 PRP39YML046W 1890 nt0.88□□□□□ -2.27
VPS27P40343 PRP42YDR235W 1635 nt0.88□□□□□ -2.27
VPS27P40343 LTE1YAL024C 4308 nt0.87□□□□□ -2.27
VPS27P40343 tM(CAU)Q1tM(CAU)Q1 76 nt0.87□□□□□ -2.27
VPS27P40343 YHR131W-AYHR131W-A 246 nt0.85□□□□□ -2.27
VPS27P40343 YPR159C-AYPR159C-A 102 nt0.85□□□□□ -2.27
VPS27P40343 YJL182CYJL182C 318 nt0.84□□□□□ -2.27
VPS27P40343 RPM2YML091C 3609 nt0.83□□□□□ -2.28
VPS27P40343 TRS65YGR166W 1683 nt0.82□□□□□ -2.28
VPS27P40343 YDR406W-AYDR406W-A 246 nt0.82□□□□□ -2.28
VPS27P40343 STF2YGR008C 255 nt0.82□□□□□ -2.28
VPS27P40343 YJL127W-AYJL127W-A 117 nt0.82□□□□□ -2.28
VPS27P40343 YEL014CYEL014C 306 nt0.81□□□□□ -2.28
VPS27P40343 SNU13YEL026W 381 nt0.8□□□□□ -2.28
VPS27P40343 UTP8YGR128C 2142 nt0.77□□□□□ -2.29
VPS27P40343 YLR232WYLR232W 348 nt0.75□□□□□ -2.29
VPS27P40343 HUG1YML058W-A 207 nt0.75□□□□□ -2.29
VPS27P40343 YBL039C-AYBL039C-A 84 nt0.75□□□□□ -2.29
VPS27P40343 TAH1YCR060W 336 nt0.74□□□□□ -2.29
VPS27P40343 BUL2YML111W 2763 nt0.74□□□□□ -2.29
VPS27P40343 YMR272W-AYMR272W-A 114 nt0.73□□□□□ -2.29
VPS27P40343 YMR160WYMR160W 2451 nt0.73□□□□□ -2.29
VPS27P40343 YEL073CYEL073C 324 nt0.72□□□□□ -2.29
VPS27P40343 YGL182CYGL182C 324 nt0.72□□□□□ -2.29
VPS27P40343 IQG1YPL242C 4488 nt0.72□□□□□ -2.29
VPS27P40343 snR52snR52 92 nt0.71□□□□□ -2.3
VPS27P40343 NNF2YGR089W 2811 nt0.71□□□□□ -2.3
VPS27P40343 YJL150WYJL150W 303 nt0.7□□□□□ -2.3
VPS27P40343 PAU12YGR294W 363 nt0.69□□□□□ -2.3
VPS27P40343 PET111YMR257C 2403 nt0.68□□□□□ -2.3
VPS27P40343 ULP2YIL031W 3105 nt0.68□□□□□ -2.3
VPS27P40343 YLR342W-AYLR342W-A 174 nt0.68□□□□□ -2.3
VPS27P40343 YOR192C-BYOR192C-B 5313 nt0.67□□□□□ -2.3
VPS27P40343 NIP1YMR309C 2439 nt0.67□□□□□ -2.3
VPS27P40343 YPL060C-AYPL060C-A 3315 nt0.67□□□□□ -2.3
VPS27P40343 YOR170WYOR170W 306 nt0.66□□□□□ -2.3
VPS27P40343 YOR381W-AYOR381W-A 168 nt0.66□□□□□ -2.3
VPS27P40343 UTP10YJL109C 5310 nt0.66□□□□□ -2.3
VPS27P40343 YLL006W-AYLL006W-A 177 nt0.65□□□□□ -2.31
VPS27P40343 RPS26AYGL189C 360 nt0.63□□□□□ -2.31
VPS27P40343 YBR072C-AYBR072C-A 162 nt0.63□□□□□ -2.31
VPS27P40343 MLP1YKR095W 5628 nt0.62□□□□□ -2.31
VPS27P40343 FMP27YLR454W 7887 nt0.62□□□□□ -2.31
VPS27P40343 YDR371C-AYDR371C-A 105 nt0.61□□□□□ -2.31
VPS27P40343 GLG1YKR058W 1851 nt0.61□□□□□ -2.31
VPS27P40343 COG6YNL041C 2520 nt0.6□□□□□ -2.31
VPS27P40343 UTP20YBL004W 7482 nt0.59□□□□□ -2.31
VPS27P40343 SDH6YDR379C-A 240 nt0.59□□□□□ -2.31
VPS27P40343 YDR544CYDR544C 429 nt0.59□□□□□ -2.31
VPS27P40343 SBH1YER087C-B 249 nt0.59□□□□□ -2.31
VPS27P40343 YOR314W-AYOR314W-A 111 nt0.59□□□□□ -2.31
VPS27P40343 snR48snR48 113 nt0.58□□□□□ -2.32
VPS27P40343 ORC3YLL004W 1851 nt0.55□□□□□ -2.32
VPS27P40343 YNL337WYNL337W 255 nt0.55□□□□□ -2.32
VPS27P40343 YBL100W-BYBL100W-B 5313 nt0.53□□□□□ -2.32
VPS27P40343 ESP1YGR098C 4893 nt0.52□□□□□ -2.33
VPS27P40343 MLP2YIL149C 5040 nt0.52□□□□□ -2.33
VPS27P40343 RCO1YMR075W 2055 nt0.5□□□□□ -2.33
VPS27P40343 YLR466C-BYLR466C-B 117 nt0.5□□□□□ -2.33
VPS27P40343 YNL198CYNL198C 303 nt0.47□□□□□ -2.33
VPS27P40343 tL(UAA)QtL(UAA)Q 85 nt0.46□□□□□ -2.34
VPS27P40343 YOR329W-AYOR329W-A 210 nt0.46□□□□□ -2.34
VPS27P40343 YGR151CYGR151C 336 nt0.45□□□□□ -2.34
VPS27P40343 tF(GAA)BtF(GAA)B 73 nt0.44□□□□□ -2.34
VPS27P40343 tF(GAA)FtF(GAA)F 73 nt0.44□□□□□ -2.34
VPS27P40343 tF(GAA)GtF(GAA)G 73 nt0.44□□□□□ -2.34
VPS27P40343 tF(GAA)H1tF(GAA)H1 73 nt0.44□□□□□ -2.34
VPS27P40343 tF(GAA)H2tF(GAA)H2 73 nt0.44□□□□□ -2.34
VPS27P40343 tF(GAA)MtF(GAA)M 73 nt0.44□□□□□ -2.34
VPS27P40343 tF(GAA)P1tF(GAA)P1 73 nt0.44□□□□□ -2.34
VPS27P40343 tF(GAA)P2tF(GAA)P2 73 nt0.44□□□□□ -2.34
VPS27P40343 YHL015W-AYHL015W-A 84 nt0.44□□□□□ -2.34
VPS27P40343 YOR102WYOR102W 351 nt0.44□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 74.5 ms