Protein–RNA interactions for Protein: P39702

VPS8, Vacuolar protein sorting-associated protein 8, yeastyeast

Predictions only

Length 1,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS8P39702 PRP42YDR235W 1635 nt1.26□□□□□ -2.21
VPS8P39702 VAM6YDL077C 3150 nt1.26□□□□□ -2.21
VPS8P39702 YDL007C-AYDL007C-A 258 nt1.26□□□□□ -2.21
VPS8P39702 Q0092Q0092 141 nt1.26□□□□□ -2.21
VPS8P39702 YER053C-AYER053C-A 114 nt1.26□□□□□ -2.21
VPS8P39702 COX5BYIL111W 456 nt1.26□□□□□ -2.21
VPS8P39702 YLR282CYLR282C 342 nt1.26□□□□□ -2.21
VPS8P39702 YML002WYML002W 2214 nt1.25□□□□□ -2.21
VPS8P39702 YOR161W-AYOR161W-A 81 nt1.25□□□□□ -2.21
VPS8P39702 NUP157YER105C 4176 nt1.25□□□□□ -2.21
VPS8P39702 YOR170WYOR170W 306 nt1.24□□□□□ -2.21
VPS8P39702 SPT7YBR081C 3999 nt1.23□□□□□ -2.21
VPS8P39702 snR190snR190 190 nt1.21□□□□□ -2.22
VPS8P39702 BFR2YDR299W 1605 nt1.2□□□□□ -2.22
VPS8P39702 YOR102WYOR102W 351 nt1.2□□□□□ -2.22
VPS8P39702 ATP8Q0080 147 nt1.19□□□□□ -2.22
VPS8P39702 SNU13YEL026W 381 nt1.19□□□□□ -2.22
VPS8P39702 YFR012W-AYFR012W-A 87 nt1.19□□□□□ -2.22
VPS8P39702 BEM2YER155C 6504 nt1.19□□□□□ -2.22
VPS8P39702 SCC2YDR180W 4482 nt1.18□□□□□ -2.22
VPS8P39702 FYV10YIL097W 1551 nt1.17□□□□□ -2.22
VPS8P39702 PRP16YKR086W 3216 nt1.17□□□□□ -2.22
VPS8P39702 YGL182CYGL182C 324 nt1.15□□□□□ -2.23
VPS8P39702 YGR164WYGR164W 336 nt1.15□□□□□ -2.23
VPS8P39702 YNL170WYNL170W 396 nt1.15□□□□□ -2.23
VPS8P39702 SEC8YPR055W 3198 nt1.14□□□□□ -2.23
VPS8P39702 YBL053WYBL053W 375 nt1.14□□□□□ -2.23
VPS8P39702 YOR314W-AYOR314W-A 111 nt1.14□□□□□ -2.23
VPS8P39702 CHS6YJL099W 2241 nt1.12□□□□□ -2.23
VPS8P39702 TAH1YCR060W 336 nt1.12□□□□□ -2.23
VPS8P39702 KAP120YPL125W 3099 nt1.12□□□□□ -2.23
VPS8P39702 BEM3YPL115C 3387 nt1.12□□□□□ -2.23
VPS8P39702 YLR232WYLR232W 348 nt1.11□□□□□ -2.23
VPS8P39702 snR48snR48 113 nt1.11□□□□□ -2.23
VPS8P39702 YLR399W-AYLR399W-A 105 nt1.1□□□□□ -2.23
VPS8P39702 YBL039C-AYBL039C-A 84 nt1.1□□□□□ -2.23
VPS8P39702 SDH6YDR379C-A 240 nt1.09□□□□□ -2.23
VPS8P39702 UBP3YER151C 2739 nt1.09□□□□□ -2.24
VPS8P39702 YJR029WYJR029W 5268 nt1.09□□□□□ -2.24
VPS8P39702 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.24
VPS8P39702 YLR041WYLR041W 321 nt1.08□□□□□ -2.24
VPS8P39702 ASE1YOR058C 2658 nt1.08□□□□□ -2.24
VPS8P39702 YDL073WYDL073W 2955 nt1.07□□□□□ -2.24
VPS8P39702 EMT1tM(CAU)D 73 nt1.05□□□□□ -2.24
VPS8P39702 EMT5tM(CAU)J1 73 nt1.05□□□□□ -2.24
VPS8P39702 EMT3tM(CAU)J2 73 nt1.05□□□□□ -2.24
VPS8P39702 EMT4tM(CAU)M 73 nt1.05□□□□□ -2.24
VPS8P39702 EMT2tM(CAU)O2 73 nt1.05□□□□□ -2.24
VPS8P39702 tM(CAU)Q2tM(CAU)Q2 78 nt1.05□□□□□ -2.24
VPS8P39702 YHR131W-AYHR131W-A 246 nt1.05□□□□□ -2.24
VPS8P39702 YPR160W-AYPR160W-A 81 nt1.05□□□□□ -2.24
VPS8P39702 YDR544CYDR544C 429 nt1.04□□□□□ -2.24
VPS8P39702 tL(UAA)QtL(UAA)Q 85 nt1.03□□□□□ -2.24
VPS8P39702 YOR329W-AYOR329W-A 210 nt1.02□□□□□ -2.25
VPS8P39702 PAU24YBR301W 363 nt1.01□□□□□ -2.25
VPS8P39702 RKR1YMR247C 4689 nt1□□□□□ -2.25
VPS8P39702 QCR9YGR183C 201 nt1□□□□□ -2.25
VPS8P39702 tN(GUU)QtN(GUU)Q 71 nt0.99□□□□□ -2.25
VPS8P39702 YNL067W-BYNL067W-B 141 nt0.99□□□□□ -2.25
VPS8P39702 YSP1YHR155W 3687 nt0.99□□□□□ -2.25
VPS8P39702 YIL142C-AYIL142C-A 333 nt0.97□□□□□ -2.25
VPS8P39702 snR39BsnR39B 96 nt0.96□□□□□ -2.26
VPS8P39702 YCL001W-BYCL001W-B 255 nt0.94□□□□□ -2.26
VPS8P39702 COG6YNL041C 2520 nt0.94□□□□□ -2.26
VPS8P39702 YBR072C-AYBR072C-A 162 nt0.92□□□□□ -2.26
VPS8P39702 YDR210WYDR210W 228 nt0.91□□□□□ -2.26
VPS8P39702 tF(GAA)BtF(GAA)B 73 nt0.91□□□□□ -2.26
VPS8P39702 tF(GAA)FtF(GAA)F 73 nt0.91□□□□□ -2.26
VPS8P39702 tF(GAA)GtF(GAA)G 73 nt0.91□□□□□ -2.26
VPS8P39702 tF(GAA)H1tF(GAA)H1 73 nt0.91□□□□□ -2.26
VPS8P39702 tF(GAA)H2tF(GAA)H2 73 nt0.91□□□□□ -2.26
VPS8P39702 tF(GAA)MtF(GAA)M 73 nt0.91□□□□□ -2.26
VPS8P39702 tF(GAA)P1tF(GAA)P1 73 nt0.91□□□□□ -2.26
VPS8P39702 tF(GAA)P2tF(GAA)P2 73 nt0.91□□□□□ -2.26
VPS8P39702 YJL127W-AYJL127W-A 117 nt0.91□□□□□ -2.26
VPS8P39702 OST4YDL232W 111 nt0.9□□□□□ -2.27
VPS8P39702 SOM1YEL059C-A 225 nt0.9□□□□□ -2.27
VPS8P39702 PAU12YGR294W 363 nt0.9□□□□□ -2.27
VPS8P39702 YCR095W-AYCR095W-A 159 nt0.89□□□□□ -2.27
VPS8P39702 LTE1YAL024C 4308 nt0.88□□□□□ -2.27
VPS8P39702 GLG1YKR058W 1851 nt0.87□□□□□ -2.27
VPS8P39702 UTP20YBL004W 7482 nt0.86□□□□□ -2.27
VPS8P39702 SEC1YDR164C 2175 nt0.85□□□□□ -2.27
VPS8P39702 YLL006W-AYLL006W-A 177 nt0.84□□□□□ -2.27
VPS8P39702 YBR099CYBR099C 384 nt0.84□□□□□ -2.27
VPS8P39702 NNF2YGR089W 2811 nt0.83□□□□□ -2.28
VPS8P39702 YGR146C-AYGR146C-A 162 nt0.83□□□□□ -2.28
VPS8P39702 YMR160WYMR160W 2451 nt0.83□□□□□ -2.28
VPS8P39702 MYO1YHR023W 5787 nt0.83□□□□□ -2.28
VPS8P39702 CSE1YGL238W 2883 nt0.82□□□□□ -2.28
VPS8P39702 ULP2YIL031W 3105 nt0.82□□□□□ -2.28
VPS8P39702 tT(AGU)BtT(AGU)B 73 nt0.82□□□□□ -2.28
VPS8P39702 tT(AGU)CtT(AGU)C 73 nt0.82□□□□□ -2.28
VPS8P39702 tT(AGU)DtT(AGU)D 73 nt0.82□□□□□ -2.28
VPS8P39702 tT(AGU)HtT(AGU)H 73 nt0.82□□□□□ -2.28
VPS8P39702 tT(AGU)I1tT(AGU)I1 73 nt0.82□□□□□ -2.28
VPS8P39702 tT(AGU)I2tT(AGU)I2 73 nt0.82□□□□□ -2.28
VPS8P39702 tT(AGU)JtT(AGU)J 73 nt0.82□□□□□ -2.28
VPS8P39702 tT(AGU)N1tT(AGU)N1 73 nt0.82□□□□□ -2.28
VPS8P39702 tT(AGU)N2tT(AGU)N2 73 nt0.82□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 24.6 ms