Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 YFL063WYFL063W 456 nt-1.33□□□□□ -2.62
SSN2P38931 snR49snR49 165 nt-1.34□□□□□ -2.62
SSN2P38931 GPI15YNL038W 690 nt-1.36□□□□□ -2.63
SSN2P38931 APQ12YIL040W 417 nt-1.37□□□□□ -2.63
SSN2P38931 YAR047CYAR047C 321 nt-1.37□□□□□ -2.63
SSN2P38931 YOR170WYOR170W 306 nt-1.37□□□□□ -2.63
SSN2P38931 YER053C-AYER053C-A 114 nt-1.38□□□□□ -2.63
SSN2P38931 PRM3YPL192C 402 nt-1.4□□□□□ -2.63
SSN2P38931 CBS1YDL069C 690 nt-1.4□□□□□ -2.63
SSN2P38931 VPS20YMR077C 666 nt-1.4□□□□□ -2.63
SSN2P38931 YFR009W-AYFR009W-A 258 nt-1.41□□□□□ -2.64
SSN2P38931 YGL052WYGL052W 306 nt-1.41□□□□□ -2.64
SSN2P38931 YIL032CYIL032C 357 nt-1.42□□□□□ -2.64
SSN2P38931 YAL066WYAL066W 309 nt-1.42□□□□□ -2.64
SSN2P38931 YMR193C-AYMR193C-A 387 nt-1.43□□□□□ -2.64
SSN2P38931 YPR010C-AYPR010C-A 219 nt-1.43□□□□□ -2.64
SSN2P38931 YGR069WYGR069W 336 nt-1.47□□□□□ -2.64
SSN2P38931 RPS27BYHR021C 249 nt-1.49□□□□□ -2.65
SSN2P38931 snR74snR74 88 nt-1.52□□□□□ -2.65
SSN2P38931 YHR125WYHR125W 306 nt-1.52□□□□□ -2.65
SSN2P38931 tY(GUA)QtY(GUA)Q 84 nt-1.53□□□□□ -2.65
SSN2P38931 TOM22YNL131W 459 nt-1.53□□□□□ -2.65
SSN2P38931 CSE2YNR010W 450 nt-1.53□□□□□ -2.65
SSN2P38931 snR189snR189 189 nt-1.53□□□□□ -2.65
SSN2P38931 SKI7YOR076C 2244 nt-1.53□□□□□ -2.65
SSN2P38931 YJL077W-AYJL077W-A 87 nt-1.54□□□□□ -2.66
SSN2P38931 YOL038C-AYOL038C-A 96 nt-1.54□□□□□ -2.66
SSN2P38931 YDR544CYDR544C 429 nt-1.55□□□□□ -2.66
SSN2P38931 YLL019W-AYLL019W-A 93 nt-1.56□□□□□ -2.66
SSN2P38931 YAF9YNL107W 681 nt-1.56□□□□□ -2.66
SSN2P38931 YJL197C-AYJL197C-A 282 nt-1.57□□□□□ -2.66
SSN2P38931 CSN9YDR179C 489 nt-1.6□□□□□ -2.67
SSN2P38931 tQ(UUG)QtQ(UUG)Q 76 nt-1.6□□□□□ -2.67
SSN2P38931 YIL115W-AYIL115W-A 372 nt-1.6□□□□□ -2.67
SSN2P38931 JLP2YMR132C 627 nt-1.6□□□□□ -2.67
SSN2P38931 snR54snR54 86 nt-1.62□□□□□ -2.67
SSN2P38931 HMRA1YCR097W 381 nt-1.64□□□□□ -2.67
SSN2P38931 YBL039C-AYBL039C-A 84 nt-1.65□□□□□ -2.67
SSN2P38931 EAF6YJR082C 342 nt-1.66□□□□□ -2.68
SSN2P38931 YOR314W-AYOR314W-A 111 nt-1.66□□□□□ -2.68
SSN2P38931 PMP2YEL017C-A 132 nt-1.67□□□□□ -2.68
SSN2P38931 YER090C-AYER090C-A 90 nt-1.67□□□□□ -2.68
SSN2P38931 YPR016W-AYPR016W-A 261 nt-1.67□□□□□ -2.68
SSN2P38931 YJL047C-AYJL047C-A 135 nt-1.68□□□□□ -2.68
SSN2P38931 YGL149WYGL149W 306 nt-1.71□□□□□ -2.68
SSN2P38931 YML099W-AYML099W-A 330 nt-1.71□□□□□ -2.68
SSN2P38931 YNL266WYNL266W 420 nt-1.73□□□□□ -2.69
SSN2P38931 YOR121CYOR121C 306 nt-1.73□□□□□ -2.69
SSN2P38931 BI2Q0110 1272 nt-1.74□□□□□ -2.69
SSN2P38931 YER006C-AYER006C-A 318 nt-1.74□□□□□ -2.69
SSN2P38931 YBR285WYBR285W 435 nt-1.74□□□□□ -2.69
SSN2P38931 snR50snR50 90 nt-1.74□□□□□ -2.69
SSN2P38931 CDC65tQ(CUG)M 72 nt-1.75□□□□□ -2.69
SSN2P38931 YER137W-AYER137W-A 306 nt-1.76□□□□□ -2.69
SSN2P38931 MPC1YGL080W 393 nt-1.76□□□□□ -2.69
SSN2P38931 YOR072W-BYOR072W-B 162 nt-1.76□□□□□ -2.69
SSN2P38931 snR69snR69 101 nt-1.79□□□□□ -2.7
SSN2P38931 Q0255Q0255 1419 nt-1.79□□□□□ -2.7
SSN2P38931 snR77snR77 88 nt-1.81□□□□□ -2.7
SSN2P38931 snR81snR81 201 nt-1.82□□□□□ -2.7
SSN2P38931 YNL205CYNL205C 423 nt-1.82□□□□□ -2.7
SSN2P38931 Q0142Q0142 177 nt-1.85□□□□□ -2.71
SSN2P38931 snR39BsnR39B 96 nt-1.85□□□□□ -2.71
SSN2P38931 YDL158CYDL158C 309 nt-1.87□□□□□ -2.71
SSN2P38931 YDR048CYDR048C 315 nt-1.87□□□□□ -2.71
SSN2P38931 YDR102CYDR102C 333 nt-1.87□□□□□ -2.71
SSN2P38931 RDS3YPR094W 324 nt-1.88□□□□□ -2.71
SSN2P38931 YLR285C-AYLR285C-A 171 nt-1.9□□□□□ -2.71
SSN2P38931 YLR434CYLR434C 384 nt-1.9□□□□□ -2.71
SSN2P38931 YGR240C-AYGR240C-A 201 nt-1.91□□□□□ -2.71
SSN2P38931 YDR543CYDR543C 300 nt-1.91□□□□□ -2.72
SSN2P38931 STE18YJR086W 333 nt-1.91□□□□□ -2.72
SSN2P38931 YAL068W-AYAL068W-A 255 nt-1.91□□□□□ -2.72
SSN2P38931 YKL123WYKL123W 381 nt-1.92□□□□□ -2.72
SSN2P38931 YML054C-AYML054C-A 159 nt-1.92□□□□□ -2.72
SSN2P38931 snR67snR67 82 nt-1.93□□□□□ -2.72
SSN2P38931 YMR315W-AYMR315W-A 108 nt-1.93□□□□□ -2.72
SSN2P38931 snR60snR60 104 nt-1.94□□□□□ -2.72
SSN2P38931 snR41snR41 95 nt-1.94□□□□□ -2.72
SSN2P38931 YOR008C-AYOR008C-A 225 nt-1.99□□□□□ -2.73
SSN2P38931 YLR202CYLR202C 327 nt-2□□□□□ -2.73
SSN2P38931 YNL122CYNL122C 348 nt-2□□□□□ -2.73
SSN2P38931 YBR126W-BYBR126W-B 144 nt-2□□□□□ -2.73
SSN2P38931 YER097WYER097W 330 nt-2.01□□□□□ -2.73
SSN2P38931 YFL032WYFL032W 321 nt-2.01□□□□□ -2.73
SSN2P38931 YMR001C-AYMR001C-A 231 nt-2.01□□□□□ -2.73
SSN2P38931 YNL028WYNL028W 318 nt-2.04□□□□□ -2.74
SSN2P38931 YNL324WYNL324W 396 nt-2.04□□□□□ -2.74
SSN2P38931 tW(UCA)QtW(UCA)Q 74 nt-2.05□□□□□ -2.74
SSN2P38931 YGR146C-AYGR146C-A 162 nt-2.07□□□□□ -2.74
SSN2P38931 YLR406C-AYLR406C-A 150 nt-2.08□□□□□ -2.74
SSN2P38931 tD(GUC)QtD(GUC)Q 75 nt-2.12□□□□□ -2.75
SSN2P38931 tM(CAU)Q2tM(CAU)Q2 78 nt-2.12□□□□□ -2.75
SSN2P38931 YOR293C-AYOR293C-A 150 nt-2.12□□□□□ -2.75
SSN2P38931 ATP6Q0085 780 nt-2.13□□□□□ -2.75
SSN2P38931 YLR286W-AYLR286W-A 135 nt-2.13□□□□□ -2.75
SSN2P38931 YFL019CYFL019C 354 nt-2.15□□□□□ -2.75
SSN2P38931 YLR120W-AYLR120W-A 102 nt-2.15□□□□□ -2.75
SSN2P38931 YOR309CYOR309C 381 nt-2.16□□□□□ -2.75
SSN2P38931 HTL1YCR020W-B 237 nt-2.17□□□□□ -2.76
Retrieved 100 of 7,029 protein–RNA pairs in 46.7 ms