Protein–RNA interactions for Protein: P32657

CHD1, Chromo domain-containing protein 1, yeastyeast

Predictions only

Length 1,468 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHD1P32657 VPS20YMR077C 666 nt-1.18□□□□□ -2.6
CHD1P32657 YER006C-AYER006C-A 318 nt-1.18□□□□□ -2.6
CHD1P32657 YOR161W-AYOR161W-A 81 nt-1.18□□□□□ -2.6
CHD1P32657 YIL071W-AYIL071W-A 477 nt-1.2□□□□□ -2.6
CHD1P32657 BI2Q0110 1272 nt-1.21□□□□□ -2.6
CHD1P32657 YFL063WYFL063W 456 nt-1.21□□□□□ -2.6
CHD1P32657 YBL039C-AYBL039C-A 84 nt-1.24□□□□□ -2.61
CHD1P32657 CSE2YNR010W 450 nt-1.28□□□□□ -2.61
CHD1P32657 YDL007C-AYDL007C-A 258 nt-1.29□□□□□ -2.62
CHD1P32657 tA(UGC)QtA(UGC)Q 76 nt-1.31□□□□□ -2.62
CHD1P32657 PRM3YPL192C 402 nt-1.31□□□□□ -2.62
CHD1P32657 RPS27BYHR021C 249 nt-1.33□□□□□ -2.62
CHD1P32657 STE18YJR086W 333 nt-1.33□□□□□ -2.62
CHD1P32657 YJL077W-AYJL077W-A 87 nt-1.34□□□□□ -2.62
CHD1P32657 SDH6YDR379C-A 240 nt-1.38□□□□□ -2.63
CHD1P32657 Q0142Q0142 177 nt-1.38□□□□□ -2.63
CHD1P32657 YMR193C-AYMR193C-A 387 nt-1.4□□□□□ -2.63
CHD1P32657 SKI7YOR076C 2244 nt-1.44□□□□□ -2.64
CHD1P32657 YER079WYER079W 633 nt-1.45□□□□□ -2.64
CHD1P32657 YNL122CYNL122C 348 nt-1.45□□□□□ -2.64
CHD1P32657 CSN9YDR179C 489 nt-1.5□□□□□ -2.65
CHD1P32657 YIL002W-AYIL002W-A 210 nt-1.5□□□□□ -2.65
CHD1P32657 YML100W-AYML100W-A 174 nt-1.5□□□□□ -2.65
CHD1P32657 YER053C-AYER053C-A 114 nt-1.51□□□□□ -2.65
CHD1P32657 YJL197C-AYJL197C-A 282 nt-1.51□□□□□ -2.65
CHD1P32657 YLR264C-AYLR264C-A 117 nt-1.54□□□□□ -2.66
CHD1P32657 snR41snR41 95 nt-1.54□□□□□ -2.66
CHD1P32657 PAU9YBL108C-A 129 nt-1.56□□□□□ -2.66
CHD1P32657 YDR543CYDR543C 300 nt-1.58□□□□□ -2.66
CHD1P32657 YGR069WYGR069W 336 nt-1.58□□□□□ -2.66
CHD1P32657 YIL115W-AYIL115W-A 372 nt-1.58□□□□□ -2.66
CHD1P32657 YLL019W-AYLL019W-A 93 nt-1.58□□□□□ -2.66
CHD1P32657 YAL068W-AYAL068W-A 255 nt-1.58□□□□□ -2.66
CHD1P32657 TOM22YNL131W 459 nt-1.6□□□□□ -2.67
CHD1P32657 APQ12YIL040W 417 nt-1.61□□□□□ -2.67
CHD1P32657 YOL013W-BYOL013W-B 291 nt-1.62□□□□□ -2.67
CHD1P32657 tP(UGG)QtP(UGG)Q 72 nt-1.63□□□□□ -2.67
CHD1P32657 YJL182CYJL182C 318 nt-1.66□□□□□ -2.68
CHD1P32657 YGL182CYGL182C 324 nt-1.69□□□□□ -2.68
CHD1P32657 YLR434CYLR434C 384 nt-1.69□□□□□ -2.68
CHD1P32657 YIL032CYIL032C 357 nt-1.69□□□□□ -2.68
CHD1P32657 YNR025CYNR025C 360 nt-1.69□□□□□ -2.68
CHD1P32657 YOR072W-BYOR072W-B 162 nt-1.69□□□□□ -2.68
CHD1P32657 YLR154W-FYLR154W-F 141 nt-1.71□□□□□ -2.68
CHD1P32657 YER137W-AYER137W-A 306 nt-1.73□□□□□ -2.69
CHD1P32657 YGL052WYGL052W 306 nt-1.75□□□□□ -2.69
CHD1P32657 HMRA1YCR097W 381 nt-1.79□□□□□ -2.7
CHD1P32657 YDR048CYDR048C 315 nt-1.79□□□□□ -2.7
CHD1P32657 snR49snR49 165 nt-1.8□□□□□ -2.7
CHD1P32657 YDR544CYDR544C 429 nt-1.82□□□□□ -2.7
CHD1P32657 tY(GUA)QtY(GUA)Q 84 nt-1.82□□□□□ -2.7
CHD1P32657 YKL063CYKL063C 504 nt-1.82□□□□□ -2.7
CHD1P32657 YLR202CYLR202C 327 nt-1.82□□□□□ -2.7
CHD1P32657 YPR016W-AYPR016W-A 261 nt-1.82□□□□□ -2.7
CHD1P32657 YPR010C-AYPR010C-A 219 nt-1.83□□□□□ -2.7
CHD1P32657 snR78snR78 87 nt-1.84□□□□□ -2.7
CHD1P32657 tR(UCU)Q1tR(UCU)Q1 73 nt-1.85□□□□□ -2.71
CHD1P32657 YLR406C-AYLR406C-A 150 nt-1.85□□□□□ -2.71
CHD1P32657 YAF9YNL107W 681 nt-1.85□□□□□ -2.71
CHD1P32657 YOR121CYOR121C 306 nt-1.88□□□□□ -2.71
CHD1P32657 YOR314W-AYOR314W-A 111 nt-1.88□□□□□ -2.71
CHD1P32657 YGL149WYGL149W 306 nt-1.9□□□□□ -2.71
CHD1P32657 snR60snR60 104 nt-1.93□□□□□ -2.72
CHD1P32657 YDL158CYDL158C 309 nt-1.93□□□□□ -2.72
CHD1P32657 tQ(UUG)QtQ(UUG)Q 76 nt-1.94□□□□□ -2.72
CHD1P32657 YMR001C-AYMR001C-A 231 nt-1.94□□□□□ -2.72
CHD1P32657 BIL1YOR304C-A 231 nt-1.94□□□□□ -2.72
CHD1P32657 snR189snR189 189 nt-1.94□□□□□ -2.72
CHD1P32657 YOR170WYOR170W 306 nt-1.94□□□□□ -2.72
CHD1P32657 YBR126W-BYBR126W-B 144 nt-1.94□□□□□ -2.72
CHD1P32657 YNL028WYNL028W 318 nt-1.99□□□□□ -2.73
CHD1P32657 tW(UCA)QtW(UCA)Q 74 nt-2.02□□□□□ -2.73
CHD1P32657 YBR285WYBR285W 435 nt-2.04□□□□□ -2.74
CHD1P32657 YML099W-AYML099W-A 330 nt-2.05□□□□□ -2.74
CHD1P32657 PMP2YEL017C-A 132 nt-2.06□□□□□ -2.74
CHD1P32657 snR74snR74 88 nt-2.08□□□□□ -2.74
CHD1P32657 ATP19YOL077W-A 207 nt-2.08□□□□□ -2.74
CHD1P32657 YEL050W-AYEL050W-A 192 nt-2.09□□□□□ -2.74
CHD1P32657 YER090C-AYER090C-A 90 nt-2.09□□□□□ -2.74
CHD1P32657 YAL063C-AYAL063C-A 291 nt-2.09□□□□□ -2.74
CHD1P32657 YNL324WYNL324W 396 nt-2.09□□□□□ -2.74
CHD1P32657 HTL1YCR020W-B 237 nt-2.11□□□□□ -2.75
CHD1P32657 snR69snR69 101 nt-2.2□□□□□ -2.76
CHD1P32657 YDR102CYDR102C 333 nt-2.22□□□□□ -2.77
CHD1P32657 RDS3YPR094W 324 nt-2.23□□□□□ -2.77
CHD1P32657 CDC65tQ(CUG)M 72 nt-2.25□□□□□ -2.77
CHD1P32657 JLP2YMR132C 627 nt-2.25□□□□□ -2.77
CHD1P32657 YLR120W-AYLR120W-A 102 nt-2.26□□□□□ -2.77
CHD1P32657 YFL032WYFL032W 321 nt-2.28□□□□□ -2.77
CHD1P32657 YNL266WYNL266W 420 nt-2.28□□□□□ -2.77
CHD1P32657 snR81snR81 201 nt-2.29□□□□□ -2.78
CHD1P32657 YGR035CYGR035C 351 nt-2.29□□□□□ -2.78
CHD1P32657 ATP6Q0085 780 nt-2.3□□□□□ -2.78
CHD1P32657 YER097WYER097W 330 nt-2.32□□□□□ -2.78
CHD1P32657 snR77snR77 88 nt-2.36□□□□□ -2.79
CHD1P32657 snR50snR50 90 nt-2.36□□□□□ -2.79
CHD1P32657 tM(CAU)Q2tM(CAU)Q2 78 nt-2.4□□□□□ -2.79
CHD1P32657 YGR146C-AYGR146C-A 162 nt-2.4□□□□□ -2.79
CHD1P32657 YMR172C-AYMR172C-A 384 nt-2.42□□□□□ -2.8
CHD1P32657 YNL205CYNL205C 423 nt-2.44□□□□□ -2.8
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms