Protein–RNA interactions for Protein: P32366

VMA6, V-type proton ATPase subunit d, yeast

Known RBP Predictions only

Length 345 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA6	P32366	YMR158W-B	YMR158W-B	321 nt		-0.44	□□□□□ -2.48
VMA6	P32366	snR46	snR46	197 nt		-0.44	□□□□□ -2.48
VMA6	P32366	YDR048C	YDR048C	315 nt		-0.45	□□□□□ -2.48
VMA6	P32366	tW(UCA)Q	tW(UCA)Q	74 nt		-0.45	□□□□□ -2.48
VMA6	P32366	YMR001C-A	YMR001C-A	231 nt		-0.45	□□□□□ -2.48
VMA6	P32366	YBR099C	YBR099C	384 nt		-0.45	□□□□□ -2.48
VMA6	P32366	CSE1	YGL238W	2883 nt		-0.45	□□□□□ -2.48
VMA6	P32366	RAD61	YDR014W	1944 nt		-0.46	□□□□□ -2.48
VMA6	P32366	YJL197C-A	YJL197C-A	282 nt		-0.47	□□□□□ -2.48
VMA6	P32366	SEC10	YLR166C	2616 nt		-0.49	□□□□□ -2.49
VMA6	P32366	URB1	YKL014C	5295 nt		-0.49	□□□□□ -2.49
VMA6	P32366	GLG1	YKR058W	1851 nt		-0.5	□□□□□ -2.49
VMA6	P32366	AGA2	YGL032C	264 nt		-0.51	□□□□□ -2.49
VMA6	P32366	YGR069W	YGR069W	336 nt		-0.51	□□□□□ -2.49
VMA6	P32366	UTP8	YGR128C	2142 nt		-0.51	□□□□□ -2.49
VMA6	P32366	YLL019W-A	YLL019W-A	93 nt		-0.51	□□□□□ -2.49
VMA6	P32366	BIL1	YOR304C-A	231 nt		-0.51	□□□□□ -2.49
VMA6	P32366	YMR193C-A	YMR193C-A	387 nt		-0.53	□□□□□ -2.49
VMA6	P32366	YNL324W	YNL324W	396 nt		-0.53	□□□□□ -2.49
VMA6	P32366	EST1	YLR233C	2100 nt		-0.53	□□□□□ -2.49
VMA6	P32366	YER053C-A	YER053C-A	114 nt		-0.55	□□□□□ -2.5
VMA6	P32366	YPR016W-A	YPR016W-A	261 nt		-0.56	□□□□□ -2.5
VMA6	P32366	snR60	snR60	104 nt		-0.58	□□□□□ -2.5
VMA6	P32366	YPR170W-A	YPR170W-A	186 nt		-0.58	□□□□□ -2.5
VMA6	P32366	SDH6	YDR379C-A	240 nt		-0.59	□□□□□ -2.5
VMA6	P32366	YJL113W	YJL113W	4647 nt		-0.61	□□□□□ -2.51
VMA6	P32366	YAL068W-A	YAL068W-A	255 nt		-0.61	□□□□□ -2.51
VMA6	P32366	YOR072W-B	YOR072W-B	162 nt		-0.61	□□□□□ -2.51
VMA6	P32366	YIR030W-A	YIR030W-A	384 nt		-0.62	□□□□□ -2.51
VMA6	P32366	YAL063C-A	YAL063C-A	291 nt		-0.62	□□□□□ -2.51
VMA6	P32366	YGR035C	YGR035C	351 nt		-0.63	□□□□□ -2.51
VMA6	P32366	YLR264C-A	YLR264C-A	117 nt		-0.65	□□□□□ -2.51
VMA6	P32366	HTL1	YCR020W-B	237 nt		-0.67	□□□□□ -2.52
VMA6	P32366	YIL002W-A	YIL002W-A	210 nt		-0.67	□□□□□ -2.52
VMA6	P32366	YJR157W	YJR157W	363 nt		-0.67	□□□□□ -2.52
VMA6	P32366	HMRA1	YCR097W	381 nt		-0.68	□□□□□ -2.52
VMA6	P32366	YIL032C	YIL032C	357 nt		-0.68	□□□□□ -2.52
VMA6	P32366	APQ12	YIL040W	417 nt		-0.68	□□□□□ -2.52
VMA6	P32366	YOR293C-A	YOR293C-A	150 nt		-0.71	□□□□□ -2.52
VMA6	P32366	YNL028W	YNL028W	318 nt		-0.72	□□□□□ -2.52
VMA6	P32366	RPM2	YML091C	3609 nt		-0.73	□□□□□ -2.53
VMA6	P32366	YCR038W-A	YCR038W-A	126 nt		-0.74	□□□□□ -2.53
VMA6	P32366	Q0017	Q0017	162 nt		-0.75	□□□□□ -2.53
VMA6	P32366	YNL067W-B	YNL067W-B	141 nt		-0.76	□□□□□ -2.53
VMA6	P32366	YDR544C	YDR544C	429 nt		-0.78	□□□□□ -2.53
VMA6	P32366	COG6	YNL041C	2520 nt		-0.78	□□□□□ -2.53
VMA6	P32366	TAH1	YCR060W	336 nt		-0.79	□□□□□ -2.54
VMA6	P32366	YOR015W	YOR015W	360 nt		-0.79	□□□□□ -2.54
VMA6	P32366	YIL071W-A	YIL071W-A	477 nt		-0.8	□□□□□ -2.54
VMA6	P32366	tT(UGU)G1	tT(UGU)G1	72 nt		-0.81	□□□□□ -2.54
VMA6	P32366	tT(UGU)G2	tT(UGU)G2	72 nt		-0.81	□□□□□ -2.54
VMA6	P32366	tT(UGU)P	tT(UGU)P	72 nt		-0.81	□□□□□ -2.54
VMA6	P32366	snR36	snR36	182 nt		-0.81	□□□□□ -2.54
VMA6	P32366	YDL007C-A	YDL007C-A	258 nt		-0.82	□□□□□ -2.54
VMA6	P32366	YLR120W-A	YLR120W-A	102 nt		-0.82	□□□□□ -2.54
VMA6	P32366	YLR154W-F	YLR154W-F	141 nt		-0.82	□□□□□ -2.54
VMA6	P32366	YDR102C	YDR102C	333 nt		-0.84	□□□□□ -2.54
VMA6	P32366	YGL149W	YGL149W	306 nt		-0.85	□□□□□ -2.55
VMA6	P32366	YHL009W-B	YHL009W-B	5409 nt		-0.85	□□□□□ -2.55
VMA6	P32366	snR74	snR74	88 nt		-0.86	□□□□□ -2.55
VMA6	P32366	YAF9	YNL107W	681 nt		-0.87	□□□□□ -2.55
VMA6	P32366	snR33	snR33	183 nt		-0.87	□□□□□ -2.55
VMA6	P32366	YDR183C-A	YDR183C-A	258 nt		-0.88	□□□□□ -2.55
VMA6	P32366	ATP6	Q0085	780 nt		-0.88	□□□□□ -2.55
VMA6	P32366	YML100W-A	YML100W-A	174 nt		-0.89	□□□□□ -2.55
VMA6	P32366	YPL060C-A	YPL060C-A	3315 nt		-0.9	□□□□□ -2.55
VMA6	P32366	tA(UGC)Q	tA(UGC)Q	76 nt		-0.91	□□□□□ -2.56
VMA6	P32366	YBL039C-A	YBL039C-A	84 nt		-0.91	□□□□□ -2.56
VMA6	P32366	YOR314W-A	YOR314W-A	111 nt		-0.92	□□□□□ -2.56
VMA6	P32366	YML099W-A	YML099W-A	330 nt		-0.95	□□□□□ -2.56
VMA6	P32366	YGL052W	YGL052W	306 nt		-0.96	□□□□□ -2.56
VMA6	P32366	YMR172C-A	YMR172C-A	384 nt		-0.96	□□□□□ -2.56
VMA6	P32366	YDR157W	YDR157W	402 nt		-0.97	□□□□□ -2.56
VMA6	P32366	YJL077W-A	YJL077W-A	87 nt		-0.97	□□□□□ -2.56
VMA6	P32366	snR161	snR161	161 nt		-0.97	□□□□□ -2.56
VMA6	P32366	YLR222C-A	YLR222C-A	231 nt		-0.99	□□□□□ -2.57
VMA6	P32366	YPL038W-A	YPL038W-A	192 nt		-1	□□□□□ -2.57
VMA6	P32366	PAU9	YBL108C-A	129 nt		-1.01	□□□□□ -2.57
VMA6	P32366	YGL182C	YGL182C	324 nt		-1.05	□□□□□ -2.58
VMA6	P32366	YPR197C	YPR197C	564 nt		-1.05	□□□□□ -2.58
VMA6	P32366	YFL032W	YFL032W	321 nt		-1.07	□□□□□ -2.58
VMA6	P32366	tQ(UUG)Q	tQ(UUG)Q	76 nt		-1.1	□□□□□ -2.59
VMA6	P32366	YOR008C-A	YOR008C-A	225 nt		-1.1	□□□□□ -2.59
VMA6	P32366	YGL041C	YGL041C	204 nt		-1.11	□□□□□ -2.59
VMA6	P32366	YBR223W-A	YBR223W-A	120 nt		-1.11	□□□□□ -2.59
VMA6	P32366	YJL182C	YJL182C	318 nt		-1.14	□□□□□ -2.59
VMA6	P32366	YPR010C-A	YPR010C-A	219 nt		-1.14	□□□□□ -2.59
VMA6	P32366	YBR182C-A	YBR182C-A	195 nt		-1.14	□□□□□ -2.59
VMA6	P32366	RPL39	YJL189W	156 nt		-1.15	□□□□□ -2.59
VMA6	P32366	YDR118W-A	YDR118W-A	117 nt		-1.16	□□□□□ -2.6
VMA6	P32366	snR69	snR69	101 nt		-1.17	□□□□□ -2.6
VMA6	P32366	YOR170W	YOR170W	306 nt		-1.17	□□□□□ -2.6
VMA6	P32366	YDL240C-A	YDL240C-A	138 nt		-1.2	□□□□□ -2.6
VMA6	P32366	VAR1	Q0140	1197 nt		-1.2	□□□□□ -2.6
VMA6	P32366	snR49	snR49	165 nt		-1.2	□□□□□ -2.6
VMA6	P32366	YER097W	YER097W	330 nt		-1.21	□□□□□ -2.6
VMA6	P32366	YDR413C	YDR413C	576 nt		-1.23	□□□□□ -2.61
VMA6	P32366	YER090C-A	YER090C-A	90 nt		-1.23	□□□□□ -2.61
VMA6	P32366	YOR381W-A	YOR381W-A	168 nt		-1.23	□□□□□ -2.61
VMA6	P32366	tM(CAU)Q2	tM(CAU)Q2	78 nt		-1.24	□□□□□ -2.61

Retrieved 100 of 7,029 protein–RNA pairs in 54.1 ms