Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
CLIP1P30622 BX119927.1-201ENST00000636596 1552 ntBASIC31.82■■■□□ 2.68
CLIP1P30622 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CLIP1P30622 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CLIP1P30622 NBPF21P-201ENST00000425093 1451 ntBASIC31.82■■■□□ 2.68
CLIP1P30622 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC31.82■■■□□ 2.68
CLIP1P30622 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CLIP1P30622 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CLIP1P30622 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CLIP1P30622 RPS2P55-201ENST00000397318 883 ntBASIC31.82■■■□□ 2.68
CLIP1P30622 AC107956.1-201ENST00000494359 873 ntBASIC31.82■■■□□ 2.68
CLIP1P30622 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CLIP1P30622 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC31.82■■■□□ 2.68
CLIP1P30622 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC31.82■■■□□ 2.68
CLIP1P30622 RARRES2P10-201ENST00000564312 460 ntBASIC31.82■■■□□ 2.68
CLIP1P30622 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CLIP1P30622 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CLIP1P30622 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC31.81■■■□□ 2.68
CLIP1P30622 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CLIP1P30622 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC31.81■■■□□ 2.68
CLIP1P30622 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
CLIP1P30622 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CLIP1P30622 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CLIP1P30622 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CLIP1P30622 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
CLIP1P30622 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CLIP1P30622 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC31.81■■■□□ 2.68
CLIP1P30622 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CLIP1P30622 F2R-202ENST00000505600 442 ntTSL 2 BASIC31.81■■■□□ 2.68
CLIP1P30622 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CLIP1P30622 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC31.81■■■□□ 2.68
CLIP1P30622 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CLIP1P30622 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
CLIP1P30622 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC31.8■■■□□ 2.68
CLIP1P30622 AC116351.2-201ENST00000606540 1585 ntBASIC31.8■■■□□ 2.68
CLIP1P30622 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CLIP1P30622 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC31.8■■■□□ 2.68
CLIP1P30622 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC31.8■■■□□ 2.68
CLIP1P30622 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CLIP1P30622 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
CLIP1P30622 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CLIP1P30622 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC31.8■■■□□ 2.68
CLIP1P30622 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC31.8■■■□□ 2.68
CLIP1P30622 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CLIP1P30622 DET1-207ENST00000564406 2315 ntTSL 2 BASIC31.79■■■□□ 2.68
CLIP1P30622 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
CLIP1P30622 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CLIP1P30622 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CLIP1P30622 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CLIP1P30622 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
CLIP1P30622 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CLIP1P30622 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC31.79■■■□□ 2.68
CLIP1P30622 ECEL1P3-201ENST00000427961 737 ntBASIC31.79■■■□□ 2.68
CLIP1P30622 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC31.79■■■□□ 2.68
CLIP1P30622 RPS20-210ENST00000523936 899 ntTSL 2 BASIC31.79■■■□□ 2.68
CLIP1P30622 CABP2-204ENST00000636477 941 ntTSL 5 BASIC31.79■■■□□ 2.68
CLIP1P30622 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CLIP1P30622 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CLIP1P30622 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC31.79■■■□□ 2.68
CLIP1P30622 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CLIP1P30622 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC31.78■■■□□ 2.68
CLIP1P30622 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CLIP1P30622 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CLIP1P30622 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CLIP1P30622 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CLIP1P30622 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC31.78■■■□□ 2.68
CLIP1P30622 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
CLIP1P30622 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC31.78■■■□□ 2.68
CLIP1P30622 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
CLIP1P30622 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CLIP1P30622 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CLIP1P30622 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CLIP1P30622 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
CLIP1P30622 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CLIP1P30622 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CLIP1P30622 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC31.77■■■□□ 2.68
CLIP1P30622 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC31.77■■■□□ 2.68
CLIP1P30622 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CLIP1P30622 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.68
CLIP1P30622 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
CLIP1P30622 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
CLIP1P30622 KRT16P5-201ENST00000455284 522 ntBASIC31.76■■■□□ 2.68
CLIP1P30622 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
CLIP1P30622 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC31.76■■■□□ 2.68
CLIP1P30622 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
CLIP1P30622 DHDH-203ENST00000522614 776 ntTSL 5 BASIC31.76■■■□□ 2.68
CLIP1P30622 BX088651.1-201ENST00000540551 451 ntBASIC31.76■■■□□ 2.68
CLIP1P30622 AC113410.3-201ENST00000623366 203 ntBASIC31.76■■■□□ 2.68
CLIP1P30622 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
CLIP1P30622 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CLIP1P30622 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CLIP1P30622 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CLIP1P30622 CLDN5-201ENST00000403084 2357 ntBASIC31.75■■■□□ 2.67
CLIP1P30622 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CLIP1P30622 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
CLIP1P30622 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
CLIP1P30622 AL049637.2-201ENST00000641778 930 ntBASIC31.75■■■□□ 2.67
CLIP1P30622 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC31.75■■■□□ 2.67
CLIP1P30622 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CLIP1P30622 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms