Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VARSP26640 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VARSP26640 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.6■□□□□ 0.73
VARSP26640 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARSP26640 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.6■□□□□ 0.73
VARSP26640 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VARSP26640 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.6■□□□□ 0.73
VARSP26640 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.6■□□□□ 0.73
VARSP26640 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VARSP26640 AC069236.1-201ENST00000604339 616 ntBASIC19.6■□□□□ 0.73
VARSP26640 AC008694.1-202ENST00000636953 945 ntBASIC19.6■□□□□ 0.73
VARSP26640 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARSP26640 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARSP26640 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VARSP26640 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARSP26640 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARSP26640 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.6■□□□□ 0.73
VARSP26640 AC087289.5-201ENST00000586076 3175 ntBASIC19.6■□□□□ 0.73
VARSP26640 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VARSP26640 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.6■□□□□ 0.73
VARSP26640 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARSP26640 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARSP26640 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARSP26640 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
VARSP26640 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARSP26640 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.59■□□□□ 0.73
VARSP26640 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARSP26640 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARSP26640 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARSP26640 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARSP26640 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARSP26640 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
VARSP26640 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARSP26640 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.59■□□□□ 0.73
VARSP26640 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.59■□□□□ 0.73
VARSP26640 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.59■□□□□ 0.73
VARSP26640 AL355472.2-201ENST00000422958 438 ntBASIC19.59■□□□□ 0.73
VARSP26640 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
VARSP26640 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.59■□□□□ 0.73
VARSP26640 GUSBP6-202ENST00000438529 1198 ntBASIC19.59■□□□□ 0.73
VARSP26640 AC093787.1-201ENST00000450396 207 ntBASIC19.59■□□□□ 0.73
VARSP26640 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
VARSP26640 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.59■□□□□ 0.73
VARSP26640 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.59■□□□□ 0.73
VARSP26640 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.59■□□□□ 0.73
VARSP26640 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARSP26640 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARSP26640 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VARSP26640 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
VARSP26640 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VARSP26640 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.58■□□□□ 0.73
VARSP26640 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VARSP26640 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.58■□□□□ 0.72
VARSP26640 MIR4758-201ENST00000577688 71 ntBASIC19.58■□□□□ 0.72
VARSP26640 AL356652.1-201ENST00000615962 565 ntBASIC19.58■□□□□ 0.72
VARSP26640 LETM1P2-201ENST00000597330 2178 ntBASIC19.58■□□□□ 0.72
VARSP26640 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
VARSP26640 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.58■□□□□ 0.72
VARSP26640 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VARSP26640 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VARSP26640 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
VARSP26640 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
VARSP26640 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.57■□□□□ 0.72
VARSP26640 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.57■□□□□ 0.72
VARSP26640 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.57■□□□□ 0.72
VARSP26640 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.57■□□□□ 0.72
VARSP26640 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARSP26640 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
VARSP26640 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VARSP26640 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
VARSP26640 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARSP26640 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
VARSP26640 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARSP26640 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARSP26640 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARSP26640 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.56■□□□□ 0.72
VARSP26640 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARSP26640 MCRIP2P1-201ENST00000394346 511 ntBASIC19.56■□□□□ 0.72
VARSP26640 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.56■□□□□ 0.72
VARSP26640 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.56■□□□□ 0.72
VARSP26640 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARSP26640 OR10C1-204ENST00000622521 1039 ntBASIC19.56■□□□□ 0.72
VARSP26640 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VARSP26640 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.56■□□□□ 0.72
VARSP26640 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VARSP26640 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms