Protein–RNA interactions for Protein: P25554

SGF29, SAGA-associated factor 29, yeastyeast

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGF29P25554 YBL053WYBL053W 375 nt1.08□□□□□ -2.24
SGF29P25554 snR46snR46 197 nt1.08□□□□□ -2.24
SGF29P25554 BEM2YER155C 6504 nt1.05□□□□□ -2.24
SGF29P25554 YPL044CYPL044C 549 nt1.05□□□□□ -2.24
SGF29P25554 YFR012W-AYFR012W-A 87 nt1.04□□□□□ -2.24
SGF29P25554 SCC2YDR180W 4482 nt1.03□□□□□ -2.24
SGF29P25554 YCR038W-AYCR038W-A 126 nt1.03□□□□□ -2.24
SGF29P25554 YDL007C-AYDL007C-A 258 nt1.03□□□□□ -2.24
SGF29P25554 ASE1YOR058C 2658 nt1.02□□□□□ -2.25
SGF29P25554 RPL26BYGR034W 384 nt1.02□□□□□ -2.25
SGF29P25554 COX12YLR038C 252 nt1.02□□□□□ -2.25
SGF29P25554 YOL014WYOL014W 375 nt1.02□□□□□ -2.25
SGF29P25554 VAM6YDL077C 3150 nt1.01□□□□□ -2.25
SGF29P25554 DOP1YDR141C 5097 nt1□□□□□ -2.25
SGF29P25554 YOR161W-AYOR161W-A 81 nt0.99□□□□□ -2.25
SGF29P25554 UTP20YBL004W 7482 nt0.99□□□□□ -2.25
SGF29P25554 HAL9YOL089C 3093 nt0.99□□□□□ -2.25
SGF29P25554 YGL123C-AYGL123C-A 231 nt0.98□□□□□ -2.25
SGF29P25554 BFR2YDR299W 1605 nt0.97□□□□□ -2.25
SGF29P25554 YER053C-AYER053C-A 114 nt0.97□□□□□ -2.25
SGF29P25554 YLR282CYLR282C 342 nt0.97□□□□□ -2.25
SGF29P25554 YLR342W-AYLR342W-A 174 nt0.97□□□□□ -2.25
SGF29P25554 snR190snR190 190 nt0.97□□□□□ -2.25
SGF29P25554 UBP3YER151C 2739 nt0.97□□□□□ -2.25
SGF29P25554 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
SGF29P25554 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
SGF29P25554 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
SGF29P25554 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
SGF29P25554 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
SGF29P25554 COX5BYIL111W 456 nt0.95□□□□□ -2.26
SGF29P25554 YIL142C-AYIL142C-A 333 nt0.95□□□□□ -2.26
SGF29P25554 YPR117WYPR117W 7470 nt0.94□□□□□ -2.26
SGF29P25554 YDL073WYDL073W 2955 nt0.94□□□□□ -2.26
SGF29P25554 YKL100W-AYKL100W-A 90 nt0.94□□□□□ -2.26
SGF29P25554 PRP16YKR086W 3216 nt0.93□□□□□ -2.26
SGF29P25554 SEC8YPR055W 3198 nt0.93□□□□□ -2.26
SGF29P25554 YIL002W-AYIL002W-A 210 nt0.92□□□□□ -2.26
SGF29P25554 YOR381W-AYOR381W-A 168 nt0.92□□□□□ -2.26
SGF29P25554 YML002WYML002W 2214 nt0.92□□□□□ -2.26
SGF29P25554 YEL073CYEL073C 324 nt0.9□□□□□ -2.27
SGF29P25554 YKL145W-AYKL145W-A 93 nt0.9□□□□□ -2.27
SGF29P25554 RKR1YMR247C 4689 nt0.9□□□□□ -2.27
SGF29P25554 YMR160WYMR160W 2451 nt0.89□□□□□ -2.27
SGF29P25554 Q0092Q0092 141 nt0.89□□□□□ -2.27
SGF29P25554 YPR160W-AYPR160W-A 81 nt0.89□□□□□ -2.27
SGF29P25554 YLR041WYLR041W 321 nt0.88□□□□□ -2.27
SGF29P25554 YLR399W-AYLR399W-A 105 nt0.88□□□□□ -2.27
SGF29P25554 FYV10YIL097W 1551 nt0.87□□□□□ -2.27
SGF29P25554 PRP42YDR235W 1635 nt0.87□□□□□ -2.27
SGF29P25554 ATP8Q0080 147 nt0.85□□□□□ -2.27
SGF29P25554 tL(UAA)QtL(UAA)Q 85 nt0.85□□□□□ -2.27
SGF29P25554 PRP5YBR237W 2550 nt0.84□□□□□ -2.28
SGF29P25554 YGL182CYGL182C 324 nt0.83□□□□□ -2.28
SGF29P25554 YBL039C-AYBL039C-A 84 nt0.83□□□□□ -2.28
SGF29P25554 SEC1YDR164C 2175 nt0.83□□□□□ -2.28
SGF29P25554 CHS6YJL099W 2241 nt0.83□□□□□ -2.28
SGF29P25554 UTP8YGR128C 2142 nt0.82□□□□□ -2.28
SGF29P25554 tN(GUU)QtN(GUU)Q 71 nt0.82□□□□□ -2.28
SGF29P25554 LTE1YAL024C 4308 nt0.82□□□□□ -2.28
SGF29P25554 TAH1YCR060W 336 nt0.81□□□□□ -2.28
SGF29P25554 YDR544CYDR544C 429 nt0.81□□□□□ -2.28
SGF29P25554 YNL170WYNL170W 396 nt0.81□□□□□ -2.28
SGF29P25554 YHL015W-AYHL015W-A 84 nt0.8□□□□□ -2.28
SGF29P25554 YOR102WYOR102W 351 nt0.8□□□□□ -2.28
SGF29P25554 YOR170WYOR170W 306 nt0.8□□□□□ -2.28
SGF29P25554 YGR164WYGR164W 336 nt0.79□□□□□ -2.28
SGF29P25554 snR39BsnR39B 96 nt0.79□□□□□ -2.28
SGF29P25554 OST4YDL232W 111 nt0.78□□□□□ -2.28
SGF29P25554 SDH6YDR379C-A 240 nt0.78□□□□□ -2.28
SGF29P25554 YOR329W-AYOR329W-A 210 nt0.78□□□□□ -2.28
SGF29P25554 YHR131W-AYHR131W-A 246 nt0.77□□□□□ -2.29
SGF29P25554 snR48snR48 113 nt0.76□□□□□ -2.29
SGF29P25554 BIR1YJR089W 2865 nt0.74□□□□□ -2.29
SGF29P25554 YIL071W-AYIL071W-A 477 nt0.74□□□□□ -2.29
SGF29P25554 YLR232WYLR232W 348 nt0.74□□□□□ -2.29
SGF29P25554 YPR159C-AYPR159C-A 102 nt0.74□□□□□ -2.29
SGF29P25554 SNU13YEL026W 381 nt0.73□□□□□ -2.29
SGF29P25554 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
SGF29P25554 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
SGF29P25554 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
SGF29P25554 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
SGF29P25554 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
SGF29P25554 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
SGF29P25554 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
SGF29P25554 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
SGF29P25554 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
SGF29P25554 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
SGF29P25554 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
SGF29P25554 BEM3YPL115C 3387 nt0.73□□□□□ -2.29
SGF29P25554 YSP1YHR155W 3687 nt0.72□□□□□ -2.29
SGF29P25554 YJL127W-AYJL127W-A 117 nt0.72□□□□□ -2.29
SGF29P25554 COG6YNL041C 2520 nt0.71□□□□□ -2.3
SGF29P25554 YCL001W-BYCL001W-B 255 nt0.71□□□□□ -2.3
SGF29P25554 YOR192C-BYOR192C-B 5313 nt0.71□□□□□ -2.3
SGF29P25554 YOR314W-AYOR314W-A 111 nt0.7□□□□□ -2.3
SGF29P25554 YDR210WYDR210W 228 nt0.68□□□□□ -2.3
SGF29P25554 YNL054W-BYNL054W-B 5250 nt0.68□□□□□ -2.3
SGF29P25554 YNL067W-BYNL067W-B 141 nt0.65□□□□□ -2.31
SGF29P25554 NNF2YGR089W 2811 nt0.65□□□□□ -2.31
SGF29P25554 PET111YMR257C 2403 nt0.63□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms