Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.21■□□□□ 0.35
CCL1P22362 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCL1P22362 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCL1P22362 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.21■□□□□ 0.35
CCL1P22362 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 BX323043.1-201ENST00000641006 1765 ntBASIC17.21■□□□□ 0.35
CCL1P22362 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCL1P22362 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCL1P22362 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.21■□□□□ 0.35
CCL1P22362 HLA-G-202ENST00000376815 851 ntBASIC17.21■□□□□ 0.35
CCL1P22362 HLA-G-203ENST00000376818 1127 ntBASIC17.21■□□□□ 0.35
CCL1P22362 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.21■□□□□ 0.35
CCL1P22362 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 AC007322.1-201ENST00000426983 750 ntBASIC17.21■□□□□ 0.35
CCL1P22362 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 AC023632.3-201ENST00000521633 145 ntBASIC17.21■□□□□ 0.35
CCL1P22362 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.21■□□□□ 0.35
CCL1P22362 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.21■□□□□ 0.35
CCL1P22362 AL589743.5-201ENST00000616611 1050 ntBASIC17.21■□□□□ 0.35
CCL1P22362 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCL1P22362 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCL1P22362 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.21■□□□□ 0.35
CCL1P22362 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL1P22362 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.21■□□□□ 0.35
CCL1P22362 AC010980.2-201ENST00000587099 1412 ntBASIC17.21■□□□□ 0.34
CCL1P22362 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCL1P22362 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCL1P22362 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CCL1P22362 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.2■□□□□ 0.34
CCL1P22362 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.2■□□□□ 0.34
CCL1P22362 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCL1P22362 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL1P22362 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL1P22362 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL1P22362 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL1P22362 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL1P22362 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.2■□□□□ 0.34
CCL1P22362 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.2■□□□□ 0.34
CCL1P22362 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.2■□□□□ 0.34
CCL1P22362 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.2■□□□□ 0.34
CCL1P22362 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL1P22362 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL1P22362 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL1P22362 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL1P22362 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL1P22362 AC005332.7-201ENST00000614046 2005 ntBASIC17.2■□□□□ 0.34
CCL1P22362 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL1P22362 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.19■□□□□ 0.34
CCL1P22362 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCL1P22362 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CCL1P22362 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.19■□□□□ 0.34
CCL1P22362 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.19■□□□□ 0.34
CCL1P22362 AL512625.2-201ENST00000417533 625 ntBASIC17.19■□□□□ 0.34
CCL1P22362 AL355472.2-201ENST00000422958 438 ntBASIC17.19■□□□□ 0.34
CCL1P22362 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 C2orf69P4-201ENST00000565394 541 ntBASIC17.19■□□□□ 0.34
CCL1P22362 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.19■□□□□ 0.34
CCL1P22362 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCL1P22362 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.19■□□□□ 0.34
CCL1P22362 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.19■□□□□ 0.34
CCL1P22362 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCL1P22362 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL1P22362 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.18■□□□□ 0.34
CCL1P22362 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CCL1P22362 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 AC093484.2-201ENST00000580996 2166 ntBASIC17.18■□□□□ 0.34
CCL1P22362 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCL1P22362 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL1P22362 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL1P22362 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL1P22362 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms