Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.04■□□□□ 0.8
VCLP18206 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.04■□□□□ 0.8
VCLP18206 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
VCLP18206 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
VCLP18206 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.04■□□□□ 0.8
VCLP18206 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
VCLP18206 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VCLP18206 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.03■□□□□ 0.8
VCLP18206 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.03■□□□□ 0.8
VCLP18206 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
VCLP18206 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VCLP18206 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.03■□□□□ 0.8
VCLP18206 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.03■□□□□ 0.8
VCLP18206 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.03■□□□□ 0.8
VCLP18206 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VCLP18206 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.03■□□□□ 0.8
VCLP18206 AC098934.4-201ENST00000564127 592 ntBASIC20.03■□□□□ 0.8
VCLP18206 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.03■□□□□ 0.8
VCLP18206 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 AIRN-201ENST00000601203 4374 ntBASIC20.03■□□□□ 0.8
VCLP18206 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.03■□□□□ 0.8
VCLP18206 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VCLP18206 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
VCLP18206 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VCLP18206 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VCLP18206 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VCLP18206 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.02■□□□□ 0.8
VCLP18206 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VCLP18206 AC020907.5-201ENST00000624372 1936 ntBASIC20.02■□□□□ 0.8
VCLP18206 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VCLP18206 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.02■□□□□ 0.8
VCLP18206 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VCLP18206 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VCLP18206 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VCLP18206 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VCLP18206 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.02■□□□□ 0.8
VCLP18206 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.02■□□□□ 0.8
VCLP18206 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.02■□□□□ 0.8
VCLP18206 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VCLP18206 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VCLP18206 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VCLP18206 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.02■□□□□ 0.8
VCLP18206 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VCLP18206 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VCLP18206 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VCLP18206 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.02■□□□□ 0.79
VCLP18206 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
VCLP18206 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
VCLP18206 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VCLP18206 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
VCLP18206 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCLP18206 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCLP18206 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCLP18206 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
VCLP18206 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCLP18206 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.01■□□□□ 0.79
VCLP18206 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.01■□□□□ 0.79
VCLP18206 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.01■□□□□ 0.79
VCLP18206 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
VCLP18206 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCLP18206 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCLP18206 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VCLP18206 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VCLP18206 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VCLP18206 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.01■□□□□ 0.79
VCLP18206 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.01■□□□□ 0.79
VCLP18206 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.01■□□□□ 0.79
VCLP18206 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.01■□□□□ 0.79
VCLP18206 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.01■□□□□ 0.79
VCLP18206 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms