Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.43■□□□□ 0.7
PCNAP12004 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCNAP12004 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCNAP12004 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.43■□□□□ 0.7
PCNAP12004 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCNAP12004 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.43■□□□□ 0.7
PCNAP12004 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCNAP12004 OR10C1-204ENST00000622521 1039 ntBASIC19.43■□□□□ 0.7
PCNAP12004 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCNAP12004 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCNAP12004 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.43■□□□□ 0.7
PCNAP12004 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCNAP12004 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCNAP12004 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCNAP12004 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCNAP12004 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.43■□□□□ 0.7
PCNAP12004 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCNAP12004 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCNAP12004 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.42■□□□□ 0.7
PCNAP12004 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.42■□□□□ 0.7
PCNAP12004 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCNAP12004 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.42■□□□□ 0.7
PCNAP12004 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.42■□□□□ 0.7
PCNAP12004 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCNAP12004 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCNAP12004 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCNAP12004 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCNAP12004 AC087289.5-201ENST00000586076 3175 ntBASIC19.42■□□□□ 0.7
PCNAP12004 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCNAP12004 KRT18P68-201ENST00000392293 1000 ntBASIC19.42■□□□□ 0.7
PCNAP12004 CDCA4P2-201ENST00000441182 718 ntBASIC19.42■□□□□ 0.7
PCNAP12004 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.42■□□□□ 0.7
PCNAP12004 AC093787.1-201ENST00000450396 207 ntBASIC19.42■□□□□ 0.7
PCNAP12004 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.42■□□□□ 0.7
PCNAP12004 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.42■□□□□ 0.7
PCNAP12004 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCNAP12004 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCNAP12004 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCNAP12004 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCNAP12004 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCNAP12004 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.42■□□□□ 0.7
PCNAP12004 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCNAP12004 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
PCNAP12004 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.41■□□□□ 0.7
PCNAP12004 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.41■□□□□ 0.7
PCNAP12004 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.41■□□□□ 0.7
PCNAP12004 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
PCNAP12004 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.41■□□□□ 0.7
PCNAP12004 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 CYP2T3P-201ENST00000601990 817 ntBASIC19.41■□□□□ 0.7
PCNAP12004 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.41■□□□□ 0.7
PCNAP12004 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PCNAP12004 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.41■□□□□ 0.7
PCNAP12004 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.41■□□□□ 0.7
PCNAP12004 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCNAP12004 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.41■□□□□ 0.7
PCNAP12004 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCNAP12004 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCNAP12004 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
PCNAP12004 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCNAP12004 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.4■□□□□ 0.7
PCNAP12004 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCNAP12004 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCNAP12004 MIR663A-201ENST00000385250 93 ntBASIC19.4■□□□□ 0.7
PCNAP12004 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCNAP12004 AC026185.1-201ENST00000445748 174 ntBASIC19.4■□□□□ 0.7
PCNAP12004 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.4■□□□□ 0.7
PCNAP12004 AC105020.6-201ENST00000621523 1217 ntBASIC19.4■□□□□ 0.7
PCNAP12004 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCNAP12004 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCNAP12004 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.4■□□□□ 0.7
PCNAP12004 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.4■□□□□ 0.7
PCNAP12004 AC010980.2-201ENST00000587099 1412 ntBASIC19.4■□□□□ 0.7
PCNAP12004 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCNAP12004 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCNAP12004 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCNAP12004 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.39■□□□□ 0.69
PCNAP12004 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.39■□□□□ 0.69
PCNAP12004 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms