Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBCP0CG48 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBCP0CG48 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBCP0CG48 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBCP0CG48 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.5■□□□□ 0.39
UBCP0CG48 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.5■□□□□ 0.39
UBCP0CG48 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBCP0CG48 AL591742.1-201ENST00000604433 565 ntBASIC17.5■□□□□ 0.39
UBCP0CG48 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBCP0CG48 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.5■□□□□ 0.39
UBCP0CG48 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
UBCP0CG48 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBCP0CG48 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBCP0CG48 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBCP0CG48 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBCP0CG48 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBCP0CG48 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBCP0CG48 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBCP0CG48 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBCP0CG48 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UBCP0CG48 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBCP0CG48 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBCP0CG48 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UBCP0CG48 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.49■□□□□ 0.39
UBCP0CG48 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBCP0CG48 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBCP0CG48 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBCP0CG48 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UBCP0CG48 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
UBCP0CG48 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.49■□□□□ 0.39
UBCP0CG48 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.49■□□□□ 0.39
UBCP0CG48 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.49■□□□□ 0.39
UBCP0CG48 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.49■□□□□ 0.39
UBCP0CG48 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.49■□□□□ 0.39
UBCP0CG48 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.49■□□□□ 0.39
UBCP0CG48 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UBCP0CG48 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBCP0CG48 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBCP0CG48 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UBCP0CG48 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
UBCP0CG48 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
UBCP0CG48 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBCP0CG48 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBCP0CG48 AIRN-201ENST00000601203 4374 ntBASIC17.49■□□□□ 0.39
UBCP0CG48 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBCP0CG48 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBCP0CG48 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
UBCP0CG48 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBCP0CG48 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBCP0CG48 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
UBCP0CG48 AC138932.1-201ENST00000534164 6830 ntBASIC17.48■□□□□ 0.39
UBCP0CG48 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBCP0CG48 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.48■□□□□ 0.39
UBCP0CG48 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBCP0CG48 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.48■□□□□ 0.39
UBCP0CG48 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBCP0CG48 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.48■□□□□ 0.39
UBCP0CG48 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBCP0CG48 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.48■□□□□ 0.39
UBCP0CG48 AL162412.1-201ENST00000567129 965 ntBASIC17.48■□□□□ 0.39
UBCP0CG48 CYP21A1P-202ENST00000354927 1481 ntBASIC17.48■□□□□ 0.39
UBCP0CG48 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBCP0CG48 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBCP0CG48 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.48■□□□□ 0.39
UBCP0CG48 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
UBCP0CG48 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
UBCP0CG48 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBCP0CG48 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UBCP0CG48 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UBCP0CG48 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBCP0CG48 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBCP0CG48 AL158211.5-201ENST00000623583 2518 ntBASIC17.47■□□□□ 0.39
UBCP0CG48 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
UBCP0CG48 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBCP0CG48 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.47■□□□□ 0.39
UBCP0CG48 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.47■□□□□ 0.39
UBCP0CG48 TERF1P5-201ENST00000477545 1207 ntBASIC17.47■□□□□ 0.39
UBCP0CG48 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.47■□□□□ 0.39
UBCP0CG48 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.47■□□□□ 0.39
UBCP0CG48 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.47■□□□□ 0.39
UBCP0CG48 AC010536.3-201ENST00000620306 533 ntBASIC17.47■□□□□ 0.39
UBCP0CG48 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBCP0CG48 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBCP0CG48 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBCP0CG48 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBCP0CG48 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.47■□□□□ 0.39
UBCP0CG48 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.47■□□□□ 0.39
UBCP0CG48 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBCP0CG48 AC116562.4-201ENST00000641316 2276 ntBASIC17.46■□□□□ 0.39
UBCP0CG48 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBCP0CG48 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBCP0CG48 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBCP0CG48 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBCP0CG48 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.46■□□□□ 0.39
UBCP0CG48 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.46■□□□□ 0.39
UBCP0CG48 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
UBCP0CG48 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.46■□□□□ 0.39
UBCP0CG48 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBCP0CG48 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.46■□□□□ 0.39
UBCP0CG48 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms