Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.18■□□□□ 0.5
FREM3P0C091 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.18■□□□□ 0.5
FREM3P0C091 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM3P0C091 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FREM3P0C091 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.18■□□□□ 0.5
FREM3P0C091 AC012618.2-201ENST00000428058 849 ntBASIC18.18■□□□□ 0.5
FREM3P0C091 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.18■□□□□ 0.5
FREM3P0C091 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
FREM3P0C091 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.18■□□□□ 0.5
FREM3P0C091 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.18■□□□□ 0.5
FREM3P0C091 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.18■□□□□ 0.5
FREM3P0C091 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM3P0C091 AL359736.2-201ENST00000621992 437 ntBASIC18.18■□□□□ 0.5
FREM3P0C091 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM3P0C091 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FREM3P0C091 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FREM3P0C091 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FREM3P0C091 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FREM3P0C091 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
FREM3P0C091 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.17■□□□□ 0.5
FREM3P0C091 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FREM3P0C091 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.17■□□□□ 0.5
FREM3P0C091 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.17■□□□□ 0.5
FREM3P0C091 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.17■□□□□ 0.5
FREM3P0C091 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
FREM3P0C091 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.17■□□□□ 0.5
FREM3P0C091 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.17■□□□□ 0.5
FREM3P0C091 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
FREM3P0C091 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FREM3P0C091 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FREM3P0C091 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.17■□□□□ 0.5
FREM3P0C091 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.17■□□□□ 0.5
FREM3P0C091 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FREM3P0C091 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.17■□□□□ 0.5
FREM3P0C091 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.17■□□□□ 0.5
FREM3P0C091 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FREM3P0C091 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.17■□□□□ 0.5
FREM3P0C091 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.17■□□□□ 0.5
FREM3P0C091 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.17■□□□□ 0.5
FREM3P0C091 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
FREM3P0C091 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FREM3P0C091 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FREM3P0C091 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FREM3P0C091 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FREM3P0C091 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.17■□□□□ 0.5
FREM3P0C091 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM3P0C091 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM3P0C091 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.16■□□□□ 0.5
FREM3P0C091 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM3P0C091 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM3P0C091 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.16■□□□□ 0.5
FREM3P0C091 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.16■□□□□ 0.5
FREM3P0C091 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.16■□□□□ 0.5
FREM3P0C091 UNC93B4-201ENST00000505679 747 ntBASIC18.16■□□□□ 0.5
FREM3P0C091 RPPH1-201ENST00000516869 333 ntBASIC18.16■□□□□ 0.5
FREM3P0C091 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM3P0C091 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.16■□□□□ 0.5
FREM3P0C091 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM3P0C091 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FREM3P0C091 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
FREM3P0C091 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FREM3P0C091 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM3P0C091 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM3P0C091 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.16■□□□□ 0.5
FREM3P0C091 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.16■□□□□ 0.5
FREM3P0C091 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
FREM3P0C091 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
FREM3P0C091 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
FREM3P0C091 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.15■□□□□ 0.5
FREM3P0C091 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.15■□□□□ 0.5
FREM3P0C091 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
FREM3P0C091 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.15■□□□□ 0.5
FREM3P0C091 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.15■□□□□ 0.5
FREM3P0C091 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 AC112907.3-201ENST00000577781 2400 ntBASIC18.15■□□□□ 0.5
FREM3P0C091 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
FREM3P0C091 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.15■□□□□ 0.5
FREM3P0C091 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM3P0C091 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
FREM3P0C091 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FREM3P0C091 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.14■□□□□ 0.5
FREM3P0C091 AC006557.6-201ENST00000623071 864 ntBASIC18.14■□□□□ 0.5
FREM3P0C091 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FREM3P0C091 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FREM3P0C091 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FREM3P0C091 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FREM3P0C091 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms