Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.4■□□□□ 0.54
THBS1P07996 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
THBS1P07996 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.39■□□□□ 0.54
THBS1P07996 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
THBS1P07996 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS1P07996 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS1P07996 AC009237.14-201ENST00000609975 1594 ntBASIC18.39■□□□□ 0.53
THBS1P07996 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.39■□□□□ 0.53
THBS1P07996 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.39■□□□□ 0.53
THBS1P07996 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS1P07996 AC093787.1-201ENST00000450396 207 ntBASIC18.39■□□□□ 0.53
THBS1P07996 AC023632.3-201ENST00000521633 145 ntBASIC18.39■□□□□ 0.53
THBS1P07996 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.39■□□□□ 0.53
THBS1P07996 C2orf69P4-201ENST00000565394 541 ntBASIC18.39■□□□□ 0.53
THBS1P07996 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.39■□□□□ 0.53
THBS1P07996 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.39■□□□□ 0.53
THBS1P07996 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS1P07996 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS1P07996 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
THBS1P07996 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.39■□□□□ 0.53
THBS1P07996 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
THBS1P07996 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.39■□□□□ 0.53
THBS1P07996 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS1P07996 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.39■□□□□ 0.53
THBS1P07996 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
THBS1P07996 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.39■□□□□ 0.53
THBS1P07996 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
THBS1P07996 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.39■□□□□ 0.53
THBS1P07996 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS1P07996 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
THBS1P07996 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.38■□□□□ 0.53
THBS1P07996 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.38■□□□□ 0.53
THBS1P07996 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.38■□□□□ 0.53
THBS1P07996 AC104771.1-201ENST00000603335 964 ntBASIC18.38■□□□□ 0.53
THBS1P07996 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.38■□□□□ 0.53
THBS1P07996 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.38■□□□□ 0.53
THBS1P07996 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.38■□□□□ 0.53
THBS1P07996 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.38■□□□□ 0.53
THBS1P07996 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.38■□□□□ 0.53
THBS1P07996 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
THBS1P07996 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS1P07996 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
THBS1P07996 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS1P07996 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS1P07996 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.37■□□□□ 0.53
THBS1P07996 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS1P07996 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
THBS1P07996 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS1P07996 NCF1B-203ENST00000435988 1254 ntBASIC18.37■□□□□ 0.53
THBS1P07996 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.37■□□□□ 0.53
THBS1P07996 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.37■□□□□ 0.53
THBS1P07996 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.37■□□□□ 0.53
THBS1P07996 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.37■□□□□ 0.53
THBS1P07996 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
THBS1P07996 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS1P07996 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS1P07996 KRT17P1-201ENST00000399211 1546 ntBASIC18.37■□□□□ 0.53
THBS1P07996 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
THBS1P07996 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS1P07996 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.37■□□□□ 0.53
THBS1P07996 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS1P07996 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS1P07996 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
THBS1P07996 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
THBS1P07996 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
THBS1P07996 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THBS1P07996 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
THBS1P07996 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
THBS1P07996 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
THBS1P07996 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THBS1P07996 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THBS1P07996 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
THBS1P07996 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THBS1P07996 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.36■□□□□ 0.53
THBS1P07996 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
THBS1P07996 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.36■□□□□ 0.53
THBS1P07996 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
THBS1P07996 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.36■□□□□ 0.53
THBS1P07996 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.36■□□□□ 0.53
THBS1P07996 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
THBS1P07996 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.36■□□□□ 0.53
THBS1P07996 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms