Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CD74P04233 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CD74P04233 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.79■□□□□ 0.28
CD74P04233 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD74P04233 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.78■□□□□ 0.28
CD74P04233 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD74P04233 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.78■□□□□ 0.28
CD74P04233 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.78■□□□□ 0.28
CD74P04233 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD74P04233 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD74P04233 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD74P04233 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD74P04233 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.78■□□□□ 0.28
CD74P04233 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD74P04233 TPRG1LP1-201ENST00000598702 760 ntBASIC16.78■□□□□ 0.28
CD74P04233 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.78■□□□□ 0.28
CD74P04233 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CD74P04233 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.78■□□□□ 0.28
CD74P04233 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD74P04233 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.78■□□□□ 0.28
CD74P04233 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD74P04233 KRT87P-202ENST00000534226 1464 ntBASIC16.78■□□□□ 0.28
CD74P04233 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.78■□□□□ 0.28
CD74P04233 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD74P04233 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.78■□□□□ 0.28
CD74P04233 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CD74P04233 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD74P04233 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.77■□□□□ 0.28
CD74P04233 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.77■□□□□ 0.28
CD74P04233 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD74P04233 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD74P04233 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CD74P04233 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD74P04233 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CD74P04233 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD74P04233 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.77■□□□□ 0.28
CD74P04233 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CD74P04233 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD74P04233 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CD74P04233 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.77■□□□□ 0.28
CD74P04233 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.77■□□□□ 0.28
CD74P04233 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CD74P04233 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.77■□□□□ 0.28
CD74P04233 FAM21FP-204ENST00000608637 956 ntBASIC16.77■□□□□ 0.28
CD74P04233 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.77■□□□□ 0.27
CD74P04233 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CD74P04233 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.77■□□□□ 0.27
CD74P04233 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.77■□□□□ 0.27
CD74P04233 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.77■□□□□ 0.27
CD74P04233 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.77■□□□□ 0.27
CD74P04233 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CD74P04233 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CD74P04233 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CD74P04233 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CD74P04233 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CD74P04233 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.77■□□□□ 0.27
CD74P04233 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CD74P04233 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CD74P04233 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CD74P04233 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CD74P04233 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CD74P04233 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.76■□□□□ 0.27
CD74P04233 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 UNC93B3-201ENST00000308076 687 ntBASIC16.76■□□□□ 0.27
CD74P04233 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CD74P04233 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CD74P04233 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.76■□□□□ 0.27
CD74P04233 AC012414.1-201ENST00000556676 535 ntBASIC16.76■□□□□ 0.27
CD74P04233 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.76■□□□□ 0.27
CD74P04233 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.76■□□□□ 0.27
CD74P04233 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.76■□□□□ 0.27
CD74P04233 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD74P04233 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CD74P04233 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD74P04233 AC099791.1-201ENST00000416440 715 ntBASIC16.75■□□□□ 0.27
CD74P04233 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CD74P04233 AC024257.2-201ENST00000549699 147 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms