Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.92■□□□□ 0.94
APOEP02649 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APOEP02649 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.91■□□□□ 0.94
APOEP02649 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.91■□□□□ 0.94
APOEP02649 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.91■□□□□ 0.94
APOEP02649 AL390719.1-204ENST00000412397 1219 ntBASIC20.91■□□□□ 0.94
APOEP02649 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.91■□□□□ 0.94
APOEP02649 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
APOEP02649 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.91■□□□□ 0.94
APOEP02649 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.91■□□□□ 0.94
APOEP02649 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.91■□□□□ 0.94
APOEP02649 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
APOEP02649 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.91■□□□□ 0.94
APOEP02649 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
APOEP02649 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
APOEP02649 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.91■□□□□ 0.94
APOEP02649 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APOEP02649 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOEP02649 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.9■□□□□ 0.94
APOEP02649 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.9■□□□□ 0.94
APOEP02649 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOEP02649 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.9■□□□□ 0.94
APOEP02649 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.9■□□□□ 0.94
APOEP02649 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOEP02649 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
APOEP02649 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOEP02649 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOEP02649 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
APOEP02649 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
APOEP02649 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.9■□□□□ 0.94
APOEP02649 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.9■□□□□ 0.94
APOEP02649 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.9■□□□□ 0.94
APOEP02649 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.9■□□□□ 0.94
APOEP02649 UNC93B5-201ENST00000530315 699 ntBASIC20.9■□□□□ 0.94
APOEP02649 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.9■□□□□ 0.94
APOEP02649 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.9■□□□□ 0.94
APOEP02649 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
APOEP02649 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOEP02649 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOEP02649 AC020907.5-201ENST00000624372 1936 ntBASIC20.9■□□□□ 0.94
APOEP02649 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
APOEP02649 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
APOEP02649 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.89■□□□□ 0.94
APOEP02649 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
APOEP02649 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
APOEP02649 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
APOEP02649 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
APOEP02649 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
APOEP02649 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
APOEP02649 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
APOEP02649 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
APOEP02649 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
APOEP02649 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
APOEP02649 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.89■□□□□ 0.93
APOEP02649 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
APOEP02649 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
APOEP02649 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
APOEP02649 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
APOEP02649 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
APOEP02649 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APOEP02649 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
APOEP02649 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
APOEP02649 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APOEP02649 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
APOEP02649 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APOEP02649 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.88■□□□□ 0.93
APOEP02649 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
APOEP02649 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APOEP02649 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.88■□□□□ 0.93
APOEP02649 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
APOEP02649 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
APOEP02649 AC023632.3-201ENST00000521633 145 ntBASIC20.88■□□□□ 0.93
APOEP02649 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.88■□□□□ 0.93
APOEP02649 MIR4651-201ENST00000582622 73 ntBASIC20.88■□□□□ 0.93
APOEP02649 DPP3P2-201ENST00000416030 1696 ntBASIC20.88■□□□□ 0.93
APOEP02649 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.88■□□□□ 0.93
APOEP02649 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
APOEP02649 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
APOEP02649 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
APOEP02649 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
APOEP02649 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APOEP02649 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms