Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.33■■□□□ 1.17
PGK1P00558 DUX4L26-201ENST00000489078 1255 ntBASIC22.33■■□□□ 1.17
PGK1P00558 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.33■■□□□ 1.17
PGK1P00558 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.33■■□□□ 1.17
PGK1P00558 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PGK1P00558 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PGK1P00558 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PGK1P00558 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PGK1P00558 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PGK1P00558 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PGK1P00558 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PGK1P00558 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.32■■□□□ 1.16
PGK1P00558 AC121338.2-201ENST00000622535 1744 ntBASIC22.32■■□□□ 1.16
PGK1P00558 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PGK1P00558 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PGK1P00558 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PGK1P00558 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.32■■□□□ 1.16
PGK1P00558 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.32■■□□□ 1.16
PGK1P00558 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.32■■□□□ 1.16
PGK1P00558 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PGK1P00558 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.32■■□□□ 1.16
PGK1P00558 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
PGK1P00558 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.32■■□□□ 1.16
PGK1P00558 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PGK1P00558 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PGK1P00558 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PGK1P00558 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.31■■□□□ 1.16
PGK1P00558 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PGK1P00558 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PGK1P00558 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.31■■□□□ 1.16
PGK1P00558 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PGK1P00558 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.31■■□□□ 1.16
PGK1P00558 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PGK1P00558 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.31■■□□□ 1.16
PGK1P00558 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
PGK1P00558 AC010203.1-204ENST00000548782 407 ntBASIC22.31■■□□□ 1.16
PGK1P00558 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
PGK1P00558 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PGK1P00558 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.31■■□□□ 1.16
PGK1P00558 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PGK1P00558 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.31■■□□□ 1.16
PGK1P00558 AL024507.2-201ENST00000606070 2574 ntBASIC22.31■■□□□ 1.16
PGK1P00558 KRT8P20-201ENST00000423953 1409 ntBASIC22.31■■□□□ 1.16
PGK1P00558 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PGK1P00558 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PGK1P00558 AL117328.2-201ENST00000624617 1940 ntBASIC22.3■■□□□ 1.16
PGK1P00558 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PGK1P00558 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PGK1P00558 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.3■■□□□ 1.16
PGK1P00558 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.3■■□□□ 1.16
PGK1P00558 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PGK1P00558 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PGK1P00558 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.3■■□□□ 1.16
PGK1P00558 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PGK1P00558 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.3■■□□□ 1.16
PGK1P00558 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PGK1P00558 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.3■■□□□ 1.16
PGK1P00558 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PGK1P00558 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PGK1P00558 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PGK1P00558 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PGK1P00558 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
PGK1P00558 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PGK1P00558 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PGK1P00558 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.29■■□□□ 1.16
PGK1P00558 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PGK1P00558 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.29■■□□□ 1.16
PGK1P00558 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.29■■□□□ 1.16
PGK1P00558 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PGK1P00558 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PGK1P00558 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
PGK1P00558 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
PGK1P00558 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PGK1P00558 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PGK1P00558 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.28■■□□□ 1.16
PGK1P00558 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PGK1P00558 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.28■■□□□ 1.16
PGK1P00558 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.28■■□□□ 1.16
PGK1P00558 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PGK1P00558 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.28■■□□□ 1.16
PGK1P00558 AL031985.4-201ENST00000642138 673 ntBASIC22.28■■□□□ 1.16
PGK1P00558 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PGK1P00558 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PGK1P00558 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PGK1P00558 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PGK1P00558 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.28■■□□□ 1.16
PGK1P00558 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PGK1P00558 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.27■■□□□ 1.16
PGK1P00558 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PGK1P00558 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PGK1P00558 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PGK1P00558 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PGK1P00558 MESTP1-201ENST00000404287 994 ntBASIC22.27■■□□□ 1.16
PGK1P00558 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.27■■□□□ 1.16
PGK1P00558 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PGK1P00558 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.27■■□□□ 1.16
PGK1P00558 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.27■■□□□ 1.16
PGK1P00558 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PGK1P00558 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PGK1P00558 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms