Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN1O95832 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN1O95832 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN1O95832 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CLDN1O95832 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN1O95832 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN1O95832 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
CLDN1O95832 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN1O95832 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.85■□□□□ 0.45
CLDN1O95832 NUDT16P1-203ENST00000513809 620 ntBASIC17.85■□□□□ 0.45
CLDN1O95832 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN1O95832 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CLDN1O95832 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN1O95832 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN1O95832 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN1O95832 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN1O95832 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN1O95832 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CLDN1O95832 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLDN1O95832 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
CLDN1O95832 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN1O95832 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN1O95832 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN1O95832 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CLDN1O95832 AL390955.1-201ENST00000428694 934 ntBASIC17.84■□□□□ 0.45
CLDN1O95832 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN1O95832 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN1O95832 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN1O95832 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN1O95832 AC073195.1-201ENST00000607241 877 ntBASIC17.84■□□□□ 0.45
CLDN1O95832 AC010947.1-201ENST00000623454 693 ntBASIC17.84■□□□□ 0.45
CLDN1O95832 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN1O95832 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN1O95832 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN1O95832 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN1O95832 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN1O95832 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN1O95832 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN1O95832 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.83■□□□□ 0.45
CLDN1O95832 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.83■□□□□ 0.45
CLDN1O95832 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN1O95832 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN1O95832 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.83■□□□□ 0.45
CLDN1O95832 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.83■□□□□ 0.45
CLDN1O95832 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN1O95832 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.83■□□□□ 0.45
CLDN1O95832 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN1O95832 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN1O95832 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN1O95832 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN1O95832 UPK3BP1-201ENST00000428678 509 ntBASIC17.83■□□□□ 0.44
CLDN1O95832 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN1O95832 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.83■□□□□ 0.44
CLDN1O95832 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN1O95832 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN1O95832 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN1O95832 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN1O95832 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN1O95832 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CLDN1O95832 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN1O95832 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN1O95832 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN1O95832 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.82■□□□□ 0.44
CLDN1O95832 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.82■□□□□ 0.44
CLDN1O95832 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.82■□□□□ 0.44
CLDN1O95832 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CLDN1O95832 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.82■□□□□ 0.44
CLDN1O95832 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN1O95832 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN1O95832 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN1O95832 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN1O95832 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN1O95832 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLDN1O95832 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN1O95832 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CLDN1O95832 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLDN1O95832 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN1O95832 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN1O95832 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN1O95832 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN1O95832 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN1O95832 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN1O95832 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN1O95832 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN1O95832 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN1O95832 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN1O95832 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN1O95832 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms