Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF4O60810 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PRAMEF4O60810 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PRAMEF4O60810 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF4O60810 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEF4O60810 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF4O60810 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.24■□□□□ 0.67
PRAMEF4O60810 AC091874.3-201ENST00000512672 1195 ntBASIC19.24■□□□□ 0.67
PRAMEF4O60810 AC023632.3-201ENST00000521633 145 ntBASIC19.24■□□□□ 0.67
PRAMEF4O60810 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.24■□□□□ 0.67
PRAMEF4O60810 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF4O60810 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF4O60810 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PRAMEF4O60810 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.23■□□□□ 0.67
PRAMEF4O60810 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PRAMEF4O60810 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.23■□□□□ 0.67
PRAMEF4O60810 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEF4O60810 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.23■□□□□ 0.67
PRAMEF4O60810 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.23■□□□□ 0.67
PRAMEF4O60810 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.23■□□□□ 0.67
PRAMEF4O60810 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PRAMEF4O60810 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.23■□□□□ 0.67
PRAMEF4O60810 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
PRAMEF4O60810 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF4O60810 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PRAMEF4O60810 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 AL158211.5-201ENST00000623583 2518 ntBASIC19.22■□□□□ 0.67
PRAMEF4O60810 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 TMEM179-206ENST00000616017 1645 ntBASIC19.22■□□□□ 0.67
PRAMEF4O60810 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 MYC-209ENST00000641252 345 ntBASIC19.22■□□□□ 0.67
PRAMEF4O60810 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF4O60810 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF4O60810 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEF4O60810 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF4O60810 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PRAMEF4O60810 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF4O60810 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF4O60810 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF4O60810 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF4O60810 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PRAMEF4O60810 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.21■□□□□ 0.67
PRAMEF4O60810 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEF4O60810 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEF4O60810 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms