Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.57■□□□□ 0.72
GFRA3O60609 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GFRA3O60609 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GFRA3O60609 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GFRA3O60609 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.56■□□□□ 0.72
GFRA3O60609 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
GFRA3O60609 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GFRA3O60609 LINC01124-201ENST00000409786 2117 ntBASIC19.56■□□□□ 0.72
GFRA3O60609 MFAP1P1-201ENST00000442257 1255 ntBASIC19.56■□□□□ 0.72
GFRA3O60609 AL160237.2-201ENST00000556165 472 ntBASIC19.56■□□□□ 0.72
GFRA3O60609 C1QL1P1-201ENST00000568105 661 ntBASIC19.56■□□□□ 0.72
GFRA3O60609 IFNL4P1-201ENST00000607083 540 ntBASIC19.56■□□□□ 0.72
GFRA3O60609 AC131212.4-201ENST00000623606 975 ntBASIC19.56■□□□□ 0.72
GFRA3O60609 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.56■□□□□ 0.72
GFRA3O60609 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GFRA3O60609 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GFRA3O60609 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GFRA3O60609 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GFRA3O60609 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GFRA3O60609 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GFRA3O60609 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GFRA3O60609 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GFRA3O60609 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GFRA3O60609 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.55■□□□□ 0.72
GFRA3O60609 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GFRA3O60609 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GFRA3O60609 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GFRA3O60609 FAM220CP-201ENST00000395253 831 ntBASIC19.55■□□□□ 0.72
GFRA3O60609 AC004980.1-204ENST00000429707 299 ntBASIC19.55■□□□□ 0.72
GFRA3O60609 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.55■□□□□ 0.72
GFRA3O60609 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.55■□□□□ 0.72
GFRA3O60609 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
GFRA3O60609 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GFRA3O60609 AL671883.3-201ENST00000603274 991 ntBASIC19.55■□□□□ 0.72
GFRA3O60609 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.55■□□□□ 0.72
GFRA3O60609 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.55■□□□□ 0.72
GFRA3O60609 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.55■□□□□ 0.72
GFRA3O60609 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GFRA3O60609 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.54■□□□□ 0.72
GFRA3O60609 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GFRA3O60609 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.54■□□□□ 0.72
GFRA3O60609 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
GFRA3O60609 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
GFRA3O60609 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.54■□□□□ 0.72
GFRA3O60609 EMBP1-201ENST00000458200 901 ntBASIC19.54■□□□□ 0.72
GFRA3O60609 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GFRA3O60609 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.54■□□□□ 0.72
GFRA3O60609 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GFRA3O60609 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.54■□□□□ 0.72
GFRA3O60609 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GFRA3O60609 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.54■□□□□ 0.72
GFRA3O60609 AC092338.2-201ENST00000568827 1415 ntBASIC19.53■□□□□ 0.72
GFRA3O60609 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.53■□□□□ 0.72
GFRA3O60609 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.53■□□□□ 0.72
GFRA3O60609 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GFRA3O60609 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
GFRA3O60609 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.53■□□□□ 0.72
GFRA3O60609 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GFRA3O60609 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GFRA3O60609 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.53■□□□□ 0.72
GFRA3O60609 AC104692.2-201ENST00000603054 253 ntBASIC19.53■□□□□ 0.72
GFRA3O60609 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.53■□□□□ 0.72
GFRA3O60609 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.53■□□□□ 0.72
GFRA3O60609 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.52■□□□□ 0.72
GFRA3O60609 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
GFRA3O60609 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.52■□□□□ 0.72
GFRA3O60609 AC068473.5-201ENST00000616428 2072 ntBASIC19.52■□□□□ 0.72
GFRA3O60609 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GFRA3O60609 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
GFRA3O60609 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GFRA3O60609 MIR1233-2-201ENST00000408138 82 ntBASIC19.52■□□□□ 0.72
GFRA3O60609 MIR1233-1-201ENST00000408722 82 ntBASIC19.52■□□□□ 0.72
GFRA3O60609 HMGN1P19-201ENST00000436976 333 ntBASIC19.52■□□□□ 0.72
GFRA3O60609 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.52■□□□□ 0.72
GFRA3O60609 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
GFRA3O60609 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
GFRA3O60609 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GFRA3O60609 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GFRA3O60609 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.52■□□□□ 0.72
GFRA3O60609 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.52■□□□□ 0.72
GFRA3O60609 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.52■□□□□ 0.72
GFRA3O60609 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GFRA3O60609 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
GFRA3O60609 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.51■□□□□ 0.71
GFRA3O60609 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GFRA3O60609 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GFRA3O60609 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GFRA3O60609 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GFRA3O60609 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.51■□□□□ 0.71
GFRA3O60609 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.51■□□□□ 0.71
GFRA3O60609 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.51■□□□□ 0.71
GFRA3O60609 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.51■□□□□ 0.71
GFRA3O60609 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
GFRA3O60609 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.51■□□□□ 0.71
GFRA3O60609 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GFRA3O60609 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GFRA3O60609 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GFRA3O60609 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
GFRA3O60609 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GFRA3O60609 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms