Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.24■□□□□ 0.83
SMAD6O43541 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMAD6O43541 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.23■□□□□ 0.83
SMAD6O43541 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMAD6O43541 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.23■□□□□ 0.83
SMAD6O43541 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMAD6O43541 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SMAD6O43541 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.23■□□□□ 0.83
SMAD6O43541 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMAD6O43541 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.23■□□□□ 0.83
SMAD6O43541 AC124016.1-201ENST00000609552 612 ntBASIC20.23■□□□□ 0.83
SMAD6O43541 FAM197Y4-202ENST00000622692 608 ntBASIC20.23■□□□□ 0.83
SMAD6O43541 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMAD6O43541 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
SMAD6O43541 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
SMAD6O43541 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMAD6O43541 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.23■□□□□ 0.83
SMAD6O43541 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMAD6O43541 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
SMAD6O43541 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.22■□□□□ 0.83
SMAD6O43541 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD6O43541 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD6O43541 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD6O43541 PKD1P6-201ENST00000343738 4769 ntBASIC20.22■□□□□ 0.83
SMAD6O43541 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD6O43541 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD6O43541 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD6O43541 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD6O43541 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD6O43541 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.22■□□□□ 0.83
SMAD6O43541 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.22■□□□□ 0.83
SMAD6O43541 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.22■□□□□ 0.83
SMAD6O43541 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.22■□□□□ 0.83
SMAD6O43541 AL121829.2-201ENST00000620908 328 ntBASIC20.22■□□□□ 0.83
SMAD6O43541 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SMAD6O43541 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD6O43541 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD6O43541 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.22■□□□□ 0.83
SMAD6O43541 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMAD6O43541 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMAD6O43541 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.21■□□□□ 0.83
SMAD6O43541 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMAD6O43541 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SMAD6O43541 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SMAD6O43541 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.21■□□□□ 0.83
SMAD6O43541 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.21■□□□□ 0.83
SMAD6O43541 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.21■□□□□ 0.83
SMAD6O43541 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.21■□□□□ 0.83
SMAD6O43541 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.21■□□□□ 0.83
SMAD6O43541 AC093827.2-201ENST00000512654 315 ntBASIC20.21■□□□□ 0.83
SMAD6O43541 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.21■□□□□ 0.83
SMAD6O43541 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.21■□□□□ 0.83
SMAD6O43541 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SMAD6O43541 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SMAD6O43541 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.21■□□□□ 0.83
SMAD6O43541 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.21■□□□□ 0.83
SMAD6O43541 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.21■□□□□ 0.83
SMAD6O43541 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMAD6O43541 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SMAD6O43541 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMAD6O43541 AL391422.3-201ENST00000603791 2761 ntBASIC20.21■□□□□ 0.83
SMAD6O43541 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMAD6O43541 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMAD6O43541 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SMAD6O43541 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SMAD6O43541 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMAD6O43541 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMAD6O43541 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMAD6O43541 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SMAD6O43541 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMAD6O43541 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMAD6O43541 KRASP1-201ENST00000407852 552 ntBASIC20.2■□□□□ 0.82
SMAD6O43541 AC239809.2-201ENST00000415381 517 ntBASIC20.2■□□□□ 0.82
SMAD6O43541 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.2■□□□□ 0.82
SMAD6O43541 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.2■□□□□ 0.82
SMAD6O43541 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.2■□□□□ 0.82
SMAD6O43541 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.2■□□□□ 0.82
SMAD6O43541 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.2■□□□□ 0.82
SMAD6O43541 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.2■□□□□ 0.82
SMAD6O43541 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.2■□□□□ 0.82
SMAD6O43541 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.2■□□□□ 0.82
SMAD6O43541 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMAD6O43541 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMAD6O43541 LINC01006-201ENST00000333319 2292 ntBASIC20.2■□□□□ 0.82
SMAD6O43541 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.2■□□□□ 0.82
SMAD6O43541 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMAD6O43541 GABARAPL3-202ENST00000624044 1851 ntBASIC20.2■□□□□ 0.82
SMAD6O43541 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMAD6O43541 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.19■□□□□ 0.82
SMAD6O43541 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMAD6O43541 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.19■□□□□ 0.82
SMAD6O43541 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMAD6O43541 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMAD6O43541 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.19■□□□□ 0.82
SMAD6O43541 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMAD6O43541 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMAD6O43541 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMAD6O43541 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMAD6O43541 UBE2SP1-201ENST00000450587 669 ntBASIC20.19■□□□□ 0.82
SMAD6O43541 AC133681.1-201ENST00000465482 601 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms