Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CHD1O14646 CCR12P-201ENST00000446203 998 ntBASIC32.71■■■□□ 2.83
CHD1O14646 HOMER2P1-201ENST00000455653 964 ntBASIC32.71■■■□□ 2.83
CHD1O14646 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC32.71■■■□□ 2.83
CHD1O14646 CYGB-204ENST00000589342 815 ntTSL 3 BASIC32.71■■■□□ 2.83
CHD1O14646 NPAP1P7-201ENST00000613027 823 ntBASIC32.71■■■□□ 2.83
CHD1O14646 AC127496.7-201ENST00000625110 1798 ntBASIC32.71■■■□□ 2.83
CHD1O14646 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CHD1O14646 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CHD1O14646 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC32.7■■■□□ 2.83
CHD1O14646 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC32.7■■■□□ 2.83
CHD1O14646 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CHD1O14646 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC32.7■■■□□ 2.83
CHD1O14646 MIR2861-201ENST00000636310 90 ntBASIC32.7■■■□□ 2.83
CHD1O14646 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
CHD1O14646 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC32.69■■■□□ 2.82
CHD1O14646 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC32.69■■■□□ 2.82
CHD1O14646 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CHD1O14646 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC32.69■■■□□ 2.82
CHD1O14646 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CHD1O14646 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CHD1O14646 GXYLT1P6-201ENST00000456472 1187 ntBASIC32.69■■■□□ 2.82
CHD1O14646 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC32.69■■■□□ 2.82
CHD1O14646 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
CHD1O14646 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC32.69■■■□□ 2.82
CHD1O14646 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
CHD1O14646 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC32.68■■■□□ 2.82
CHD1O14646 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CHD1O14646 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC32.68■■■□□ 2.82
CHD1O14646 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CHD1O14646 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CHD1O14646 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CHD1O14646 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC32.68■■■□□ 2.82
CHD1O14646 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC32.68■■■□□ 2.82
CHD1O14646 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC32.68■■■□□ 2.82
CHD1O14646 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
CHD1O14646 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CHD1O14646 AC112907.2-201ENST00000448639 330 ntBASIC32.68■■■□□ 2.82
CHD1O14646 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC32.68■■■□□ 2.82
CHD1O14646 PRR29-207ENST00000580752 458 ntTSL 3 BASIC32.68■■■□□ 2.82
CHD1O14646 AC006538.3-201ENST00000612495 578 ntBASIC32.68■■■□□ 2.82
CHD1O14646 AC116562.4-202ENST00000641738 218 ntBASIC32.68■■■□□ 2.82
CHD1O14646 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC32.68■■■□□ 2.82
CHD1O14646 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC32.67■■■□□ 2.82
CHD1O14646 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
CHD1O14646 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC32.67■■■□□ 2.82
CHD1O14646 YBX1P10-201ENST00000444752 975 ntBASIC32.67■■■□□ 2.82
CHD1O14646 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC32.67■■■□□ 2.82
CHD1O14646 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC32.67■■■□□ 2.82
CHD1O14646 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC32.67■■■□□ 2.82
CHD1O14646 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
CHD1O14646 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC32.67■■■□□ 2.82
CHD1O14646 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC32.67■■■□□ 2.82
CHD1O14646 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CHD1O14646 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
CHD1O14646 KRT8P36-201ENST00000489121 1440 ntBASIC32.66■■■□□ 2.82
CHD1O14646 FXN-203ENST00000396366 922 ntTSL 2 BASIC32.66■■■□□ 2.82
CHD1O14646 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CHD1O14646 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC32.66■■■□□ 2.82
CHD1O14646 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC32.66■■■□□ 2.82
CHD1O14646 CR769767.2-201ENST00000622735 460 ntBASIC32.66■■■□□ 2.82
CHD1O14646 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
CHD1O14646 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC32.66■■■□□ 2.82
CHD1O14646 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
CHD1O14646 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CHD1O14646 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
CHD1O14646 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CHD1O14646 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC32.65■■■□□ 2.82
CHD1O14646 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CHD1O14646 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC32.65■■■□□ 2.82
CHD1O14646 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
CHD1O14646 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CHD1O14646 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CHD1O14646 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CHD1O14646 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC32.65■■■□□ 2.82
CHD1O14646 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CHD1O14646 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
CHD1O14646 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CHD1O14646 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CHD1O14646 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC32.65■■■□□ 2.82
CHD1O14646 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC32.65■■■□□ 2.82
CHD1O14646 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CHD1O14646 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.82
CHD1O14646 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CHD1O14646 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC32.64■■■□□ 2.82
CHD1O14646 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
CHD1O14646 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.82
CHD1O14646 AP000593.1-201ENST00000393668 712 ntBASIC32.64■■■□□ 2.82
CHD1O14646 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
CHD1O14646 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CHD1O14646 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CHD1O14646 AC111152.3-201ENST00000569699 673 ntBASIC32.64■■■□□ 2.82
CHD1O14646 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC32.64■■■□□ 2.82
CHD1O14646 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC32.64■■■□□ 2.82
CHD1O14646 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC32.64■■■□□ 2.82
CHD1O14646 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC32.64■■■□□ 2.82
CHD1O14646 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CHD1O14646 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CHD1O14646 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC32.64■■■□□ 2.82
CHD1O14646 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms