Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 AC116050.2-201ENST00000612102 1779 ntBASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 AL354811.1-201ENST00000610286 706 ntBASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 RARRES2P11-201ENST00000635158 484 ntBASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 AL158211.5-201ENST00000623583 2518 ntBASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
TRAV13-1A0A0B4J241 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 KRT16P2-201ENST00000414673 1423 ntBASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 MIR2861-201ENST00000636310 90 ntBASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV13-1A0A0B4J241 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV13-1A0A0B4J241 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 MIR939-201ENST00000401314 82 ntBASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 TPRG1LP1-201ENST00000598702 760 ntBASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV13-1A0A0B4J241 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms