Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV5-3A0A0A0MS03 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV5-3A0A0A0MS03 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.74■□□□□ 0.59
TRBV5-3A0A0A0MS03 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV5-3A0A0A0MS03 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 AP001271.2-201ENST00000624018 1556 ntBASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 RARRES2P4-201ENST00000514074 484 ntBASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 KRT16P6-202ENST00000425692 1426 ntBASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.73■□□□□ 0.59
TRBV5-3A0A0A0MS03 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 MCRIP2P1-201ENST00000394346 511 ntBASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 NTF6G-201ENST00000591094 616 ntBASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 KRT8P20-201ENST00000423953 1409 ntBASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-3A0A0A0MS03 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 AC105020.6-201ENST00000621523 1217 ntBASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-3A0A0A0MS03 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.71■□□□□ 0.58
TRBV5-3A0A0A0MS03 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms