Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 KRT8P20-201ENST00000423953 1409 ntBASIC19■□□□□ 0.63
CCDC187A0A096LP49 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CCDC187A0A096LP49 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC187A0A096LP49 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CCDC187A0A096LP49 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19■□□□□ 0.63
CCDC187A0A096LP49 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19■□□□□ 0.63
CCDC187A0A096LP49 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19■□□□□ 0.63
CCDC187A0A096LP49 FITM1-202ENST00000559294 800 ntBASIC19■□□□□ 0.63
CCDC187A0A096LP49 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19■□□□□ 0.63
CCDC187A0A096LP49 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19■□□□□ 0.63
CCDC187A0A096LP49 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19■□□□□ 0.63
CCDC187A0A096LP49 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19■□□□□ 0.63
CCDC187A0A096LP49 KRT18P22-201ENST00000402024 1347 ntBASIC19■□□□□ 0.63
CCDC187A0A096LP49 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC187A0A096LP49 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 AC121338.2-201ENST00000622535 1744 ntBASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 AL390955.1-201ENST00000428694 934 ntBASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 PTBP1P-201ENST00000554374 1601 ntBASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC187A0A096LP49 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC187A0A096LP49 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC187A0A096LP49 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC187A0A096LP49 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC187A0A096LP49 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC187A0A096LP49 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC187A0A096LP49 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC187A0A096LP49 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC187A0A096LP49 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC187A0A096LP49 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC187A0A096LP49 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 AL137013.1-201ENST00000432946 1228 ntBASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 KRT18P57-201ENST00000443599 1254 ntBASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC187A0A096LP49 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC187A0A096LP49 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms