Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 AC100791.3-201ENST00000617619 330 ntBASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 MIR6821-201ENST00000617625 74 ntBASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 AC112907.3-201ENST00000577781 2400 ntBASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV30A0A087WSZ9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 CYP21A1P-202ENST00000354927 1481 ntBASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 AC137761.2-201ENST00000561729 223 ntBASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 AC145350.3-201ENST00000569033 163 ntBASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 AC087289.5-201ENST00000586076 3175 ntBASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV30A0A087WSZ9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 TMEM179-206ENST00000616017 1645 ntBASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 KRT18P61-201ENST00000585825 1298 ntBASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 BX119927.1-201ENST00000636596 1552 ntBASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV30A0A087WSZ9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms