Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 RNA5SP218-201ENST00000363188 109 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 RBBP4P4-201ENST00000398588 1289 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 HNRNPCP2-201ENST00000399515 881 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 RPE-205ENST00000429907 925 ntTSL 2 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 HBBP1-201ENST00000433329 439 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 SLC25A24P1-202ENST00000434803 1220 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 ST13P2-201ENST00000438916 1109 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 RPL10P6-201ENST00000457497 318 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 RN7SL124P-201ENST00000498656 285 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 GCSHP1-201ENST00000512554 484 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AC106800.2-201ENST00000514009 1103 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 CHCHD3P2-201ENST00000550751 639 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 BMS1P8-201ENST00000565049 1178 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AC005518.2-201ENST00000603254 282 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AL137190.1-201ENST00000603288 282 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AC080112.3-201ENST00000612552 880 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AP000770.2-201ENST00000623694 100 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AC009039.2-201ENST00000624524 529 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AC129908.1-201ENST00000624553 648 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AC010480.1-201ENST00000624823 684 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 ZBTB20-AS5-203ENST00000628886 819 ntTSL 5 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AC233280.20-201ENST00000637412 416 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 MTCO1P15-201ENST00000529569 1526 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 AC112243.1-201ENST00000623949 3851 ntBASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PACSIN3Q9UKS6 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AC092999.1-201ENST00000624004 1924 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AP003471.1-202ENST00000319051 1988 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 RNA5SP463-201ENST00000363030 120 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 PKMP3-201ENST00000405497 715 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 RN7SKP232-201ENST00000410170 290 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 IFNA12P-201ENST00000413147 571 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AC109638.1-201ENST00000417406 326 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AL627308.2-201ENST00000420014 432 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 RBMY2JP-201ENST00000425544 1059 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 RPL35P8-201ENST00000433284 337 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 RPS21P1-201ENST00000434479 247 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AL354983.1-201ENST00000434580 906 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 RPL6P24-201ENST00000445338 864 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 CEACAMP5-201ENST00000448037 961 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 ENTPD1-AS1-206ENST00000449197 523 ntTSL 2 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AC117395.2-201ENST00000463122 1128 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 RN7SL815P-201ENST00000470970 290 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 RN7SL332P-201ENST00000482163 254 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AC114300.1-201ENST00000502347 280 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AC079768.1-201ENST00000503181 711 ntBASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.03□□□□□ -1.28
PACSIN3Q9UKS6 PABPC1P1-201ENST00000506347 591 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms