Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 OR9K2-201ENST00000305377 1122 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 MAML3-201ENST00000398940 831 ntTSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 OR6C72P-201ENST00000451403 892 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC114755.1-201ENST00000453101 868 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 C1DP3-201ENST00000455013 423 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC084871.2-201ENST00000503355 464 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC233724.1-201ENST00000503894 233 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 NAMPTP2-201ENST00000505629 1115 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC008677.3-201ENST00000519146 666 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AP001636.2-201ENST00000525517 696 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 LRRC34P1-201ENST00000542742 915 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC011270.1-201ENST00000558606 583 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC090888.2-201ENST00000559765 1144 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 MIR4786-201ENST00000583954 80 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 OR7E94P-202ENST00000601375 790 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AL513548.2-201ENST00000602994 1207 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC093783.1-201ENST00000612976 329 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC009159.2-201ENST00000617603 606 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 BX005195.1-201ENST00000618097 1198 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 TUBBP10-201ENST00000427668 1301 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 PSMC1P7-201ENST00000495689 1315 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 AC096745.2-201ENST00000627783 1914 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TRIM48Q8IWZ4 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC015871.4-201ENST00000624650 2260 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 RNU4-39P-201ENST00000362455 127 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 RNA5SP448-201ENST00000363151 111 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 SNORA27.3-201ENST00000364937 134 ntBASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
TRIM48Q8IWZ4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms