Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 BX005040.2-201ENST00000620504 370 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AC004943.1-203ENST00000624370 1074 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AC022726.2-201ENST00000634673 547 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AC123912.3-201ENST00000600907 1367 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AC092821.2-201ENST00000545710 2042 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 RPL12P13-201ENST00000310055 497 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 RPL10P16-201ENST00000325000 645 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AC008171.1-201ENST00000395058 200 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 SEPT7P2-202ENST00000398921 823 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 FTH1P26-201ENST00000406512 701 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 RPSAP44-201ENST00000406712 884 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AL157698.1-201ENST00000415190 1011 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 PPIL1P1-201ENST00000423936 499 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 VDAC2P3-201ENST00000430995 828 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AL034399.1-201ENST00000451535 380 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 NDUFB4P1-201ENST00000462398 381 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 PABPC1P10-201ENST00000464731 381 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 HNRNPA1P17-201ENST00000496620 924 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AC126177.6-201ENST00000550420 1009 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 MIR4258-201ENST00000580920 91 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AC027271.1-201ENST00000610270 610 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AC034229.6-201ENST00000623704 224 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 MFSD8-256ENST00000641949 1640 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AC091544.5-201ENST00000620192 3815 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 AL356361.1-201ENST00000400943 1459 ntBASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZNF549Q6P9A3 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AL034417.4-202ENST00000642135 2236 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 RNU4-81P-201ENST00000363561 144 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 RN7SKP62-201ENST00000384539 329 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 NHP2P2-201ENST00000396362 460 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 TYMSP1-201ENST00000407851 869 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 RN7SKP254-201ENST00000410685 310 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 RPSAP1-201ENST00000421328 880 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms