Protein–RNA interactions for Protein: P28360

MSX1, Homeobox protein MSX-1, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1P28360 AL137100.1-201ENST00000556703 1620 ntBASIC8.01□□□□□ -1.13
MSX1P28360 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
MSX1P28360 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
MSX1P28360 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
MSX1P28360 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 CLLU1OS-201ENST00000378487 686 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 AL512430.2-201ENST00000406786 339 ntBASIC8.01□□□□□ -1.13
MSX1P28360 RN7SKP110-201ENST00000410146 285 ntBASIC8.01□□□□□ -1.13
MSX1P28360 OR4K6P-201ENST00000416478 897 ntBASIC8.01□□□□□ -1.13
MSX1P28360 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC8.01□□□□□ -1.13
MSX1P28360 AL109913.1-201ENST00000421173 514 ntBASIC8.01□□□□□ -1.13
MSX1P28360 WRBP1-201ENST00000423352 334 ntBASIC8.01□□□□□ -1.13
MSX1P28360 PNRC2P1-201ENST00000423940 420 ntBASIC8.01□□□□□ -1.13
MSX1P28360 RPL5P4-201ENST00000434805 886 ntBASIC8.01□□□□□ -1.13
MSX1P28360 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC8.01□□□□□ -1.13
MSX1P28360 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC8.01□□□□□ -1.13
MSX1P28360 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC8.01□□□□□ -1.13
MSX1P28360 RBMY2OP-201ENST00000447105 810 ntBASIC8.01□□□□□ -1.13
MSX1P28360 AP1B1P1-202ENST00000448124 191 ntBASIC8.01□□□□□ -1.13
MSX1P28360 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC8.01□□□□□ -1.13
MSX1P28360 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC8.01□□□□□ -1.13
MSX1P28360 SNX18P4-201ENST00000456554 838 ntBASIC8.01□□□□□ -1.13
MSX1P28360 PET100-201ENST00000456958 219 ntTSL 2 BASIC8.01□□□□□ -1.13
MSX1P28360 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC8.01□□□□□ -1.13
MSX1P28360 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC8.01□□□□□ -1.13
MSX1P28360 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC8.01□□□□□ -1.13
MSX1P28360 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC8.01□□□□□ -1.13
MSX1P28360 AC018448.2-201ENST00000548295 305 ntBASIC8.01□□□□□ -1.13
MSX1P28360 OR7E159P-201ENST00000553761 298 ntBASIC8.01□□□□□ -1.13
MSX1P28360 AL352979.1-201ENST00000554238 297 ntBASIC8.01□□□□□ -1.13
MSX1P28360 AC005479.1-201ENST00000554629 451 ntBASIC8.01□□□□□ -1.13
MSX1P28360 AC006530.1-201ENST00000555980 571 ntBASIC8.01□□□□□ -1.13
MSX1P28360 ZNF519P2-201ENST00000557032 169 ntBASIC8.01□□□□□ -1.13
MSX1P28360 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC8.01□□□□□ -1.13
MSX1P28360 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC8.01□□□□□ -1.13
MSX1P28360 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC8.01□□□□□ -1.13
MSX1P28360 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC8.01□□□□□ -1.13
MSX1P28360 AADACP1-206ENST00000561502 1193 ntBASIC8.01□□□□□ -1.13
MSX1P28360 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.01□□□□□ -1.13
MSX1P28360 AC116553.2-201ENST00000564203 463 ntBASIC8.01□□□□□ -1.13
MSX1P28360 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC8.01□□□□□ -1.13
MSX1P28360 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC8.01□□□□□ -1.13
MSX1P28360 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 IMMP1LP1-201ENST00000605170 488 ntBASIC8.01□□□□□ -1.13
MSX1P28360 AL391497.1-201ENST00000608671 547 ntBASIC8.01□□□□□ -1.13
MSX1P28360 AC026367.2-201ENST00000610630 553 ntBASIC8.01□□□□□ -1.13
MSX1P28360 MIR6127-201ENST00000614019 109 ntBASIC8.01□□□□□ -1.13
MSX1P28360 AC048341.3-201ENST00000619323 491 ntBASIC8.01□□□□□ -1.13
MSX1P28360 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
MSX1P28360 AC005355.2-201ENST00000625064 484 ntBASIC8.01□□□□□ -1.13
MSX1P28360 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.01□□□□□ -1.13
MSX1P28360 CUBNP1-201ENST00000412710 1790 ntBASIC8.01□□□□□ -1.13
MSX1P28360 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 LINC02291-201ENST00000355909 1670 ntTSL 2 BASIC8.01□□□□□ -1.13
MSX1P28360 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC8.01□□□□□ -1.13
MSX1P28360 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC8.01□□□□□ -1.13
MSX1P28360 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
MSX1P28360 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.01□□□□□ -1.13
MSX1P28360 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MSX1P28360 AC008937.3-201ENST00000606813 1700 ntBASIC8□□□□□ -1.13
MSX1P28360 ZNF680P1-201ENST00000436625 1469 ntBASIC8□□□□□ -1.13
MSX1P28360 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MSX1P28360 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
MSX1P28360 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MSX1P28360 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
MSX1P28360 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC8□□□□□ -1.13
MSX1P28360 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MSX1P28360 LANCL1-201ENST00000233714 1647 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MSX1P28360 DDX43P1-201ENST00000510713 1763 ntBASIC8□□□□□ -1.13
MSX1P28360 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MSX1P28360 FGG-204ENST00000405164 1539 ntTSL 5 BASIC8□□□□□ -1.13
MSX1P28360 ATP5A1P3-201ENST00000573189 1507 ntBASIC8□□□□□ -1.13
MSX1P28360 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
MSX1P28360 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8□□□□□ -1.13
MSX1P28360 MIR365B-201ENST00000362317 111 ntBASIC8□□□□□ -1.13
MSX1P28360 RNU6-697P-201ENST00000363348 107 ntBASIC8□□□□□ -1.13
MSX1P28360 SNORA72.1-201ENST00000363485 129 ntBASIC8□□□□□ -1.13
MSX1P28360 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC8□□□□□ -1.13
MSX1P28360 RNU6-1200P-201ENST00000384162 107 ntBASIC8□□□□□ -1.13
MSX1P28360 RNU6-1042P-201ENST00000384204 107 ntBASIC8□□□□□ -1.13
MSX1P28360 OR13D3P-201ENST00000412501 937 ntBASIC8□□□□□ -1.13
MSX1P28360 SEPT7P8-201ENST00000413308 775 ntBASIC8□□□□□ -1.13
MSX1P28360 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC8□□□□□ -1.13
MSX1P28360 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC8□□□□□ -1.13
MSX1P28360 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC8□□□□□ -1.13
MSX1P28360 AL355863.1-201ENST00000424331 293 ntBASIC8□□□□□ -1.13
MSX1P28360 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC8□□□□□ -1.13
MSX1P28360 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC8□□□□□ -1.13
MSX1P28360 CYCSP42-201ENST00000450823 238 ntBASIC8□□□□□ -1.13
MSX1P28360 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC8□□□□□ -1.13
MSX1P28360 AL391825.1-202ENST00000458136 741 ntBASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms