Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 IGLC4-201ENST00000517690 248 ntBASIC8.39□□□□□ -1.07
HLA-DOAP06340 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 AC096708.2-201ENST00000577676 512 ntBASIC8.39□□□□□ -1.07
HLA-DOAP06340 AC011447.2-201ENST00000592921 283 ntBASIC8.39□□□□□ -1.07
HLA-DOAP06340 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HLA-DOAP06340 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
HLA-DOAP06340 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 AC018688.1-201ENST00000636528 1754 ntBASIC8.38□□□□□ -1.07
HLA-DOAP06340 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 HMGN1P32-201ENST00000441744 256 ntBASIC8.38□□□□□ -1.07
HLA-DOAP06340 AL356121.1-201ENST00000442911 156 ntBASIC8.38□□□□□ -1.07
HLA-DOAP06340 GOT2P2-201ENST00000450663 1251 ntBASIC8.38□□□□□ -1.07
HLA-DOAP06340 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 RPL23AP8-201ENST00000479812 475 ntBASIC8.38□□□□□ -1.07
HLA-DOAP06340 PFN2-213ENST00000494827 793 ntTSL 4 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 MRPL57P6-201ENST00000506570 309 ntBASIC8.38□□□□□ -1.07
HLA-DOAP06340 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 AC026616.1-201ENST00000523157 525 ntBASIC8.38□□□□□ -1.07
HLA-DOAP06340 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 AL132640.1-201ENST00000559594 619 ntBASIC8.38□□□□□ -1.07
HLA-DOAP06340 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 AC025287.2-201ENST00000621911 668 ntBASIC8.38□□□□□ -1.07
HLA-DOAP06340 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
HLA-DOAP06340 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 AL358913.2-201ENST00000553881 1548 ntBASIC8.38□□□□□ -1.07
HLA-DOAP06340 AL162171.3-201ENST00000617439 3178 ntBASIC8.38□□□□□ -1.07
HLA-DOAP06340 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-DOAP06340 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 RNA5SP176-201ENST00000390956 110 ntBASIC8.37□□□□□ -1.07
HLA-DOAP06340 AL359715.1-201ENST00000404330 555 ntBASIC8.37□□□□□ -1.07
HLA-DOAP06340 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 RPL18AP14-201ENST00000417685 526 ntBASIC8.37□□□□□ -1.07
HLA-DOAP06340 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 MYL6P3-201ENST00000436904 432 ntBASIC8.37□□□□□ -1.07
HLA-DOAP06340 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 EIF4A3P1-201ENST00000578499 647 ntBASIC8.37□□□□□ -1.07
HLA-DOAP06340 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms