Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 LSM3P3-201ENST00000436601 306 ntBASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AC016559.1-201ENST00000511420 199 ntBASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 RN7SKP233-201ENST00000517005 110 ntBASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 OR7E154P-201ENST00000525174 932 ntBASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 EIF4A3P1-201ENST00000578499 647 ntBASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AC013731.1-201ENST00000604340 883 ntBASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AC063962.1-201ENST00000608199 521 ntBASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AC078909.2-201ENST00000620584 398 ntBASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 FGL2-202ENST00000637771 989 ntBASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 SPATA31C1-201ENST00000420021 3895 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC084782.1-201ENST00000564401 2465 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC092725.2-201ENST00000567658 1389 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AL137918.1-201ENST00000624542 1922 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 MAPK10-379ENST00000642013 1385 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 RNA5SP177-201ENST00000410122 107 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 RN7SKP271-201ENST00000410528 320 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 CDK7P1-201ENST00000434574 693 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC009237.4-201ENST00000441078 238 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC114755.1-201ENST00000453101 868 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC004692.1-201ENST00000455430 424 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AP000805.1-201ENST00000471604 784 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC095057.1-201ENST00000507583 168 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC023827.2-201ENST00000566880 1061 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 ACTG1P15-201ENST00000570019 1063 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 SNORA70D-201ENST00000578836 135 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 IGLJCOR18-201ENST00000584002 424 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AL589765.5-201ENST00000596133 515 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 OR7E161P-202ENST00000641994 1033 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC007406.5-201ENST00000570140 3170 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 CLCA3P-203ENST00000490028 2781 ntBASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.49□□□□□ -1.37
RSPO3Q9BXY4 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms