Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 AP001636.1-201ENST00000531997 1122 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX3Q99909 DCN-207ENST00000546370 586 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC6.22□□□□□ -1.41
SSX3Q99909 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX3Q99909 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX3Q99909 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 PRR13P3-201ENST00000603578 376 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 IGKV1OR1-1-201ENST00000613775 347 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 GAS2-210ENST00000630668 674 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 AC009950.2-201ENST00000636548 183 ntBASIC6.22□□□□□ -1.41
SSX3Q99909 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SSX3Q99909 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX3Q99909 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX3Q99909 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SSX3Q99909 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX3Q99909 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SSX3Q99909 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.41
SSX3Q99909 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
SSX3Q99909 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SSX3Q99909 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SSX3Q99909 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.21□□□□□ -1.41
SSX3Q99909 AC123912.3-201ENST00000600907 1367 ntBASIC6.21□□□□□ -1.41
SSX3Q99909 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SSX3Q99909 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SSX3Q99909 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SSX3Q99909 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SSX3Q99909 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC6.21□□□□□ -1.42
SSX3Q99909 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX3Q99909 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SSX3Q99909 RNU1-16P-201ENST00000365477 164 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 RN7SKP1-201ENST00000365525 307 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.21□□□□□ -1.42
SSX3Q99909 HMGB3P1-201ENST00000393368 573 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX3Q99909 OLA1P1-201ENST00000396387 1189 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 SMC4P1-201ENST00000414479 527 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AC023141.1-201ENST00000419418 379 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 FABP5P1-201ENST00000423401 411 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 FTH1P5-201ENST00000425761 545 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX3Q99909 DDX11L10-201ENST00000430178 571 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX3Q99909 AL590682.1-201ENST00000437248 344 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 FABP5P2-201ENST00000439042 408 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AC140479.1-201ENST00000440423 337 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.21□□□□□ -1.42
SSX3Q99909 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AL583856.1-201ENST00000454078 1101 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX3Q99909 AC106774.2-201ENST00000510266 406 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AC097460.2-201ENST00000511857 741 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AC022296.2-201ENST00000512424 202 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 OR7E2P-201ENST00000533071 889 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AP005597.1-201ENST00000534192 802 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC6.21□□□□□ -1.42
SSX3Q99909 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX3Q99909 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.21□□□□□ -1.42
SSX3Q99909 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX3Q99909 AC090415.1-201ENST00000581877 847 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX3Q99909 AC007262.1-201ENST00000604099 321 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AC139493.1-201ENST00000604368 397 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX3Q99909 5S_rRNA.20-201ENST00000612104 118 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AC143336.1-201ENST00000614164 836 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.21□□□□□ -1.42
SSX3Q99909 AL353684.1-201ENST00000622677 1120 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 MAPK10-261ENST00000641050 3109 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSX3Q99909 AC126773.4-201ENST00000612545 3043 ntBASIC6.21□□□□□ -1.42
SSX3Q99909 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX3Q99909 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SSX3Q99909 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSX3Q99909 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSX3Q99909 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX3Q99909 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SSX3Q99909 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC6.21□□□□□ -1.42
SSX3Q99909 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms