Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MIR3137-201ENST00000577367 75 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 MIR6745-201ENST00000612694 127 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 IGKV1OR1-1-201ENST00000613775 347 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 AC007224.2-201ENST00000625011 510 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 AL590396.2-201ENST00000636511 1041 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 OR7E11P-202ENST00000642027 1491 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 HDAC1P1-201ENST00000455482 1445 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 RNA5SP297-201ENST00000391029 113 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 U3.31-201ENST00000408113 216 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 OR10U1P-201ENST00000414690 905 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 CRIP1P3-201ENST00000416794 220 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC011753.4-201ENST00000417974 311 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 MTND2P15-201ENST00000418575 892 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 BMS1P12-201ENST00000428213 706 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC005550.2-201ENST00000476382 318 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 RN7SL445P-201ENST00000495609 293 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC113398.2-201ENST00000507630 558 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 BNIP3P35-201ENST00000604530 490 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 KATNBL1P1-201ENST00000605192 748 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC005790.1-201ENST00000619774 450 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 OR4C1P-202ENST00000641065 1569 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AC007406.5-201ENST00000570140 3170 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SNX18Q96RF0 AL035563.1-201ENST00000609087 1539 ntBASIC6.76□□□□□ -1.33
SNX18Q96RF0 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 SNX18P3-202ENST00000565670 1750 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 CDY10P-201ENST00000452415 1567 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 RNU1-24P-201ENST00000364285 165 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 AMELY-202ENST00000383036 621 ntTSL 5 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms