Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC7.79□□□□□ -1.16
NID1P14543 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC7.79□□□□□ -1.16
NID1P14543 AC109458.1-201ENST00000508858 316 ntBASIC7.79□□□□□ -1.16
NID1P14543 SNCA-211ENST00000508895 905 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
NID1P14543 AC091965.2-201ENST00000512324 613 ntBASIC7.79□□□□□ -1.16
NID1P14543 CR383658.1-201ENST00000514609 734 ntBASIC7.79□□□□□ -1.16
NID1P14543 OR10J2P-201ENST00000514684 961 ntBASIC7.79□□□□□ -1.16
NID1P14543 HMGB1P46-201ENST00000520062 610 ntBASIC7.79□□□□□ -1.16
NID1P14543 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.79□□□□□ -1.16
NID1P14543 AC138356.2-201ENST00000521192 667 ntBASIC7.79□□□□□ -1.16
NID1P14543 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
NID1P14543 AP002963.1-201ENST00000530590 184 ntBASIC7.79□□□□□ -1.16
NID1P14543 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NID1P14543 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.79□□□□□ -1.16
NID1P14543 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.79□□□□□ -1.16
NID1P14543 MIR3680-2-201ENST00000578247 87 ntBASIC7.79□□□□□ -1.16
NID1P14543 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.79□□□□□ -1.16
NID1P14543 RN7SL118P-201ENST00000580570 302 ntBASIC7.79□□□□□ -1.16
NID1P14543 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC7.79□□□□□ -1.16
NID1P14543 MIR3680-1-201ENST00000581433 87 ntBASIC7.79□□□□□ -1.16
NID1P14543 AP005262.1-201ENST00000582646 997 ntBASIC7.79□□□□□ -1.16
NID1P14543 MIR5008-201ENST00000584300 94 ntBASIC7.79□□□□□ -1.16
NID1P14543 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.79□□□□□ -1.16
NID1P14543 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NID1P14543 AC026150.3-201ENST00000602595 499 ntBASIC7.79□□□□□ -1.16
NID1P14543 SNCA-212ENST00000611107 297 ntTSL 5 BASIC7.79□□□□□ -1.16
NID1P14543 AC008498.1-201ENST00000613012 531 ntBASIC7.79□□□□□ -1.16
NID1P14543 AC100793.4-201ENST00000613683 429 ntBASIC7.79□□□□□ -1.16
NID1P14543 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
NID1P14543 MIR6754-201ENST00000621121 66 ntBASIC7.79□□□□□ -1.16
NID1P14543 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.79□□□□□ -1.16
NID1P14543 AC135068.3-201ENST00000623441 1125 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NID1P14543 AC012100.3-201ENST00000624738 575 ntBASIC7.79□□□□□ -1.16
NID1P14543 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.79□□□□□ -1.16
NID1P14543 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC7.79□□□□□ -1.16
NID1P14543 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC7.79□□□□□ -1.16
NID1P14543 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NID1P14543 AC012360.3-201ENST00000610036 3449 ntBASIC7.79□□□□□ -1.16
NID1P14543 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NID1P14543 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
NID1P14543 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC7.79□□□□□ -1.16
NID1P14543 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NID1P14543 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NID1P14543 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NID1P14543 AL606490.2-201ENST00000457562 1330 ntBASIC7.78□□□□□ -1.16
NID1P14543 MFSD1P1-201ENST00000576210 1327 ntBASIC7.78□□□□□ -1.16
NID1P14543 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC7.78□□□□□ -1.16
NID1P14543 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NID1P14543 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
NID1P14543 KDELC1P1-201ENST00000512118 1509 ntBASIC7.78□□□□□ -1.16
NID1P14543 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC7.78□□□□□ -1.16
NID1P14543 MAPK10-329ENST00000641555 2656 ntBASIC7.78□□□□□ -1.16
NID1P14543 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NID1P14543 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
NID1P14543 USP3-208ENST00000558285 1742 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NID1P14543 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NID1P14543 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC7.78□□□□□ -1.16
NID1P14543 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC7.78□□□□□ -1.16
NID1P14543 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NID1P14543 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC7.78□□□□□ -1.16
NID1P14543 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
NID1P14543 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.78□□□□□ -1.16
NID1P14543 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.78□□□□□ -1.16
NID1P14543 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC7.78□□□□□ -1.16
NID1P14543 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
NID1P14543 RNA5SP145-201ENST00000363124 125 ntBASIC7.78□□□□□ -1.16
NID1P14543 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NID1P14543 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.78□□□□□ -1.16
NID1P14543 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.78□□□□□ -1.16
NID1P14543 Y_RNA.390-201ENST00000383932 102 ntBASIC7.78□□□□□ -1.16
NID1P14543 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.78□□□□□ -1.16
NID1P14543 FTH1P10-201ENST00000401830 930 ntBASIC7.78□□□□□ -1.16
NID1P14543 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NID1P14543 RPS7-204ENST00000407445 833 ntTSL 2 BASIC7.78□□□□□ -1.16
NID1P14543 AL590084.1-201ENST00000407885 387 ntBASIC7.78□□□□□ -1.16
NID1P14543 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NID1P14543 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.78□□□□□ -1.16
NID1P14543 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC7.78□□□□□ -1.16
NID1P14543 RPL7P53-201ENST00000421245 739 ntBASIC7.78□□□□□ -1.16
NID1P14543 AC116050.1-206ENST00000423774 213 ntBASIC7.78□□□□□ -1.16
NID1P14543 AL354761.1-201ENST00000434190 526 ntBASIC7.78□□□□□ -1.16
NID1P14543 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC7.78□□□□□ -1.16
NID1P14543 SDHDP2-201ENST00000436937 465 ntBASIC7.78□□□□□ -1.16
NID1P14543 RPL5P27-201ENST00000437011 881 ntBASIC7.78□□□□□ -1.16
NID1P14543 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.78□□□□□ -1.16
NID1P14543 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.78□□□□□ -1.16
NID1P14543 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NID1P14543 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC7.78□□□□□ -1.16
NID1P14543 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.78□□□□□ -1.16
NID1P14543 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
NID1P14543 AC017002.3-201ENST00000455309 757 ntTSL 2 BASIC7.78□□□□□ -1.16
NID1P14543 AMD1P1-201ENST00000457220 922 ntBASIC7.78□□□□□ -1.16
NID1P14543 AC016546.1-201ENST00000473590 463 ntBASIC7.78□□□□□ -1.16
NID1P14543 GAPDHP47-201ENST00000489113 999 ntBASIC7.78□□□□□ -1.16
NID1P14543 MYL12BP2-201ENST00000503948 512 ntBASIC7.78□□□□□ -1.16
NID1P14543 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NID1P14543 OR5H4P-201ENST00000510851 923 ntBASIC7.78□□□□□ -1.16
NID1P14543 TRIM6-211ENST00000515022 1060 ntTSL 2 BASIC7.78□□□□□ -1.16
NID1P14543 AC106774.1-201ENST00000515105 321 ntBASIC7.78□□□□□ -1.16
NID1P14543 AP001646.1-201ENST00000527936 915 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms