Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 U3.1-201ENST00000362500 215 ntBASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 RN7SKP254-201ENST00000410685 310 ntBASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 AC109638.1-201ENST00000417406 326 ntBASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 AC018892.2-201ENST00000457656 693 ntBASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 AC016144.1-201ENST00000548175 1087 ntBASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 AC233290.1-201ENST00000553021 1186 ntBASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 AC211433.3-201ENST00000623770 375 ntBASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 TATDN2P3-201ENST00000452855 3665 ntBASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RSPO3Q9BXY4 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 RNU4-81P-201ENST00000363561 144 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 SNORD15A-201ENST00000384214 148 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 MIR640-201ENST00000385086 96 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 GAPDHP55-201ENST00000423136 803 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 AL121916.1-201ENST00000429405 308 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 AC105052.2-201ENST00000434317 794 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 AL161626.1-201ENST00000441480 490 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 RPL7P14-201ENST00000449851 741 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 PCMTD1P3-201ENST00000451824 472 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 AC005517.1-201ENST00000452091 489 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 PABPC1P10-201ENST00000464731 381 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 PGBD4P1-201ENST00000473644 407 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 BMS1P8-201ENST00000565049 1178 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 AC006116.6-201ENST00000593258 1103 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 AL109936.2-201ENST00000605350 650 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 FAM27E3-202ENST00000614611 340 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 uc_338.37-201ENST00000620113 186 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 AC016542.3-201ENST00000623520 619 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.51□□□□□ -1.37
RSPO3Q9BXY4 AC106872.6-201ENST00000514228 1346 ntBASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 MTND6P1-201ENST00000417434 424 ntBASIC6.5□□□□□ -1.37
RSPO3Q9BXY4 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms