Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC7.62□□□□□ -1.19
NEK3P51956 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC7.62□□□□□ -1.19
NEK3P51956 AC091304.5-201ENST00000568969 158 ntBASIC7.62□□□□□ -1.19
NEK3P51956 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.62□□□□□ -1.19
NEK3P51956 AC005518.2-201ENST00000603254 282 ntBASIC7.62□□□□□ -1.19
NEK3P51956 AC012467.1-201ENST00000607740 256 ntBASIC7.62□□□□□ -1.19
NEK3P51956 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.62□□□□□ -1.19
NEK3P51956 MIR7162-201ENST00000611134 69 ntBASIC7.62□□□□□ -1.19
NEK3P51956 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.62□□□□□ -1.19
NEK3P51956 BX005040.2-201ENST00000620504 370 ntBASIC7.62□□□□□ -1.19
NEK3P51956 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 AC129908.1-201ENST00000624553 648 ntBASIC7.62□□□□□ -1.19
NEK3P51956 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.62□□□□□ -1.19
NEK3P51956 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.62□□□□□ -1.19
NEK3P51956 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.62□□□□□ -1.19
NEK3P51956 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.62□□□□□ -1.19
NEK3P51956 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 MAPK10-365ENST00000641902 3825 ntBASIC7.61□□□□□ -1.19
NEK3P51956 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 AC092821.2-201ENST00000545710 2042 ntBASIC7.61□□□□□ -1.19
NEK3P51956 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 AC007938.1-201ENST00000562524 2902 ntBASIC7.61□□□□□ -1.19
NEK3P51956 AC113608.1-201ENST00000398740 305 ntBASIC7.61□□□□□ -1.19
NEK3P51956 RPL12P10-201ENST00000413498 498 ntBASIC7.61□□□□□ -1.19
NEK3P51956 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC7.61□□□□□ -1.19
NEK3P51956 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.61□□□□□ -1.19
NEK3P51956 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC7.61□□□□□ -1.19
NEK3P51956 GRPEL2P2-201ENST00000421856 670 ntBASIC7.61□□□□□ -1.19
NEK3P51956 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.61□□□□□ -1.19
NEK3P51956 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC7.61□□□□□ -1.19
NEK3P51956 PPIL1P1-201ENST00000423936 499 ntBASIC7.61□□□□□ -1.19
NEK3P51956 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.61□□□□□ -1.19
NEK3P51956 AC092570.2-201ENST00000452117 1143 ntBASIC7.61□□□□□ -1.19
NEK3P51956 OR7E62P-201ENST00000456741 477 ntBASIC7.61□□□□□ -1.19
NEK3P51956 RN7SL751P-201ENST00000473281 284 ntBASIC7.61□□□□□ -1.19
NEK3P51956 RN7SL153P-201ENST00000486501 292 ntBASIC7.61□□□□□ -1.19
NEK3P51956 AP004833.1-201ENST00000507987 1238 ntBASIC7.61□□□□□ -1.19
NEK3P51956 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC7.61□□□□□ -1.19
NEK3P51956 OSTC-204ENST00000512478 663 ntTSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.61□□□□□ -1.19
NEK3P51956 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.61□□□□□ -1.19
NEK3P51956 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.61□□□□□ -1.19
NEK3P51956 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC7.61□□□□□ -1.19
NEK3P51956 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC7.61□□□□□ -1.19
NEK3P51956 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.61□□□□□ -1.19
NEK3P51956 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 RN7SL697P-201ENST00000582484 299 ntBASIC7.61□□□□□ -1.19
NEK3P51956 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 AL121583.1-201ENST00000612444 682 ntBASIC7.61□□□□□ -1.19
NEK3P51956 AC006335.3-201ENST00000613408 292 ntBASIC7.61□□□□□ -1.19
NEK3P51956 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.61□□□□□ -1.19
NEK3P51956 AC241377.2-202ENST00000636462 997 ntBASIC7.61□□□□□ -1.19
NEK3P51956 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.61□□□□□ -1.19
NEK3P51956 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
NEK3P51956 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.61□□□□□ -1.19
NEK3P51956 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
NEK3P51956 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
NEK3P51956 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NEK3P51956 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NEK3P51956 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
NEK3P51956 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NEK3P51956 CDY11P-201ENST00000447168 1651 ntBASIC7.6□□□□□ -1.19
NEK3P51956 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NEK3P51956 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NEK3P51956 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NEK3P51956 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
NEK3P51956 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
NEK3P51956 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NEK3P51956 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms