Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 RNU1-47P-201ENST00000362966 163 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 GZMB-203ENST00000382542 666 ntTSL 2 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 MIR654-201ENST00000385199 81 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 SNORA3.1-201ENST00000408166 111 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 SNX18P3-201ENST00000424993 835 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC244505.2-201ENST00000435089 759 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 CLUHP5-201ENST00000438421 774 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AP1B1P1-202ENST00000448124 191 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 BZW1P1-201ENST00000454901 1240 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 RN7SL395P-201ENST00000462960 291 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC131233.1-201ENST00000479200 955 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC098679.3-203ENST00000514881 919 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 IGHVII-22-1-201ENST00000517888 265 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC067852.5-201ENST00000589299 310 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC137695.2-201ENST00000603123 754 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AL021918.1-201ENST00000603933 236 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AL355333.1-201ENST00000605632 279 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC103974.2-201ENST00000611319 778 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AP000842.4-201ENST00000638781 748 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 HLA-B-257ENST00000640094 147 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AL391261.1-201ENST00000555712 1479 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC105114.1-201ENST00000624795 1862 ntBASIC6.13□□□□□ -1.43
BEST4Q8NFU0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.13□□□□□ -1.43
BEST4Q8NFU0 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC022905.1-201ENST00000503430 3048 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 FUNDC2P3-201ENST00000334716 533 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 RNU4-64P-201ENST00000410795 131 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC004129.1-201ENST00000417617 796 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 RPE-205ENST00000429907 925 ntTSL 2 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 RPL4P2-201ENST00000447259 1282 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 RPS4XP23-201ENST00000487801 237 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AL031073.1-201ENST00000503029 1139 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 MARK2P4-201ENST00000503381 2380 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 AC087280.1-201ENST00000530632 1003 ntBASIC6.12□□□□□ -1.43
BEST4Q8NFU0 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.12□□□□□ -1.43
BEST4Q8NFU0 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms