Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RPL10P16-201ENST00000325000 645 ntBASIC4.97□□□□□ -1.61
RPL39P62891 MIR197-201ENST00000384976 75 ntBASIC4.97□□□□□ -1.61
RPL39P62891 MIR654-201ENST00000385199 81 ntBASIC4.97□□□□□ -1.61
RPL39P62891 PTMAP8-201ENST00000397729 342 ntBASIC4.97□□□□□ -1.61
RPL39P62891 AL355862.1-201ENST00000412705 353 ntBASIC4.97□□□□□ -1.61
RPL39P62891 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC4.97□□□□□ -1.61
RPL39P62891 AC146944.2-202ENST00000425529 658 ntTSL 3 BASIC4.97□□□□□ -1.61
RPL39P62891 RANP5-201ENST00000427731 655 ntBASIC4.97□□□□□ -1.61
RPL39P62891 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC4.97□□□□□ -1.61
RPL39P62891 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC4.97□□□□□ -1.61
RPL39P62891 AL122003.1-201ENST00000435206 784 ntBASIC4.97□□□□□ -1.61
RPL39P62891 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC4.97□□□□□ -1.61
RPL39P62891 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC4.97□□□□□ -1.61
RPL39P62891 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC4.97□□□□□ -1.61
RPL39P62891 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 AC098679.3-203ENST00000514881 919 ntBASIC4.97□□□□□ -1.61
RPL39P62891 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC4.97□□□□□ -1.61
RPL39P62891 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC4.97□□□□□ -1.61
RPL39P62891 OR4A21P-201ENST00000532759 944 ntBASIC4.97□□□□□ -1.61
RPL39P62891 AP000619.1-201ENST00000540293 1000 ntBASIC4.97□□□□□ -1.61
RPL39P62891 EEF1A1P17-201ENST00000547505 1275 ntBASIC4.97□□□□□ -1.61
RPL39P62891 NUTF2P2-201ENST00000551207 384 ntBASIC4.97□□□□□ -1.61
RPL39P62891 FXNP1-201ENST00000555153 337 ntBASIC4.97□□□□□ -1.61
RPL39P62891 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC4.97□□□□□ -1.61
RPL39P62891 AC063923.2-201ENST00000562158 928 ntBASIC4.97□□□□□ -1.61
RPL39P62891 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC4.97□□□□□ -1.61
RPL39P62891 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC4.97□□□□□ -1.61
RPL39P62891 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC4.97□□□□□ -1.61
RPL39P62891 GTF2IP6-201ENST00000583143 541 ntBASIC4.97□□□□□ -1.61
RPL39P62891 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC4.97□□□□□ -1.61
RPL39P62891 AL022324.3-201ENST00000609330 747 ntBASIC4.97□□□□□ -1.61
RPL39P62891 AL731556.2-201ENST00000615610 770 ntBASIC4.97□□□□□ -1.61
RPL39P62891 AC005383.1-201ENST00000622689 534 ntBASIC4.97□□□□□ -1.61
RPL39P62891 AC004943.1-203ENST00000624370 1074 ntBASIC4.97□□□□□ -1.61
RPL39P62891 RPL36AP21-202ENST00000639134 430 ntBASIC4.97□□□□□ -1.61
RPL39P62891 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RPL39P62891 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC4.97□□□□□ -1.61
RPL39P62891 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC4.97□□□□□ -1.61
RPL39P62891 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC4.97□□□□□ -1.61
RPL39P62891 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC4.96□□□□□ -1.61
RPL39P62891 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
RPL39P62891 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
RPL39P62891 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
RPL39P62891 OR2AH1P-202ENST00000641232 2744 ntBASIC4.96□□□□□ -1.61
RPL39P62891 TEK-202ENST00000406359 3935 ntTSL 2 BASIC4.96□□□□□ -1.61
RPL39P62891 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
RPL39P62891 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
RPL39P62891 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC4.96□□□□□ -1.61
RPL39P62891 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 WASF5P-205ENST00000428639 1455 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC4.96□□□□□ -1.62
RPL39P62891 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC4.96□□□□□ -1.62
RPL39P62891 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC4.96□□□□□ -1.62
RPL39P62891 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC4.96□□□□□ -1.62
RPL39P62891 AC022905.1-201ENST00000503430 3048 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AC074198.1-201ENST00000506546 1397 ntBASIC4.96□□□□□ -1.62
RPL39P62891 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC4.96□□□□□ -1.62
RPL39P62891 SFTPD-AS1-201ENST00000608229 5001 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 RNA5SP71-201ENST00000362967 126 ntBASIC4.96□□□□□ -1.62
RPL39P62891 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPL39P62891 MIR541-201ENST00000401360 84 ntBASIC4.96□□□□□ -1.62
RPL39P62891 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC4.96□□□□□ -1.62
RPL39P62891 RBMY2YP-201ENST00000423333 912 ntBASIC4.96□□□□□ -1.62
RPL39P62891 GAPDHP73-201ENST00000423411 1007 ntBASIC4.96□□□□□ -1.62
RPL39P62891 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC4.96□□□□□ -1.62
RPL39P62891 PMS2P11-201ENST00000451831 574 ntBASIC4.96□□□□□ -1.62
RPL39P62891 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC4.96□□□□□ -1.62
RPL39P62891 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC4.96□□□□□ -1.62
RPL39P62891 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC4.96□□□□□ -1.62
RPL39P62891 RN7SL797P-201ENST00000486314 297 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AC063943.2-201ENST00000495697 534 ntBASIC4.96□□□□□ -1.62
RPL39P62891 NMNAT1P4-201ENST00000505598 840 ntBASIC4.96□□□□□ -1.62
RPL39P62891 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC4.96□□□□□ -1.62
RPL39P62891 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC4.96□□□□□ -1.62
RPL39P62891 LINC01085-203ENST00000511195 326 ntBASIC4.96□□□□□ -1.62
RPL39P62891 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC4.96□□□□□ -1.62
RPL39P62891 SCARNA20.3-201ENST00000516913 131 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms