Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 MARK2P4-201ENST00000503381 2380 ntBASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AL359396.1-201ENST00000623151 2376 ntBASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 OR5M2P-202ENST00000641241 4242 ntBASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 RPL10P16-201ENST00000325000 645 ntBASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 SNORD46-201ENST00000364043 104 ntBASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 LST1-211ENST00000376110 433 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 GCNT6-201ENST00000379591 934 ntBASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 GAPDHP51-201ENST00000426454 1000 ntBASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AC103855.4-201ENST00000533158 265 ntBASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AC090241.1-201ENST00000587732 621 ntBASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AL136139.1-201ENST00000605568 222 ntBASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AL157392.4-201ENST00000609756 345 ntBASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 OR7E117P-201ENST00000422682 1112 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 FDPSP1-201ENST00000424976 1071 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 MTND2P2-201ENST00000434633 945 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 PMS2P11-201ENST00000451831 574 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 RN7SL180P-201ENST00000466769 294 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 OR7E163P-201ENST00000505943 894 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 COL6A4P2-205ENST00000509855 506 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 IGLV1-62-201ENST00000518003 441 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 COX6CP16-201ENST00000603667 216 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AP001554.1-201ENST00000604533 376 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 FXYD6P1-201ENST00000604857 285 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AC008993.2-201ENST00000631744 806 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AL034408.1-201ENST00000637712 664 ntBASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 ENSA-215ENST00000638926 360 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP1Q96SZ6 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms