Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL136985.2-201ENST00000607372 535 ntBASIC7.62□□□□□ -1.19
APOEP02649 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
APOEP02649 FRG2MP-201ENST00000613317 856 ntBASIC7.62□□□□□ -1.19
APOEP02649 uc_338.37-201ENST00000620113 186 ntBASIC7.62□□□□□ -1.19
APOEP02649 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
APOEP02649 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
APOEP02649 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
APOEP02649 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
APOEP02649 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
APOEP02649 MFSD8-217ENST00000641178 4374 ntBASIC7.62□□□□□ -1.19
APOEP02649 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
APOEP02649 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
APOEP02649 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
APOEP02649 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.62□□□□□ -1.19
APOEP02649 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.62□□□□□ -1.19
APOEP02649 AC005614.1-201ENST00000598952 3653 ntBASIC7.62□□□□□ -1.19
APOEP02649 AC073342.2-201ENST00000595842 1800 ntBASIC7.62□□□□□ -1.19
APOEP02649 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.61□□□□□ -1.19
APOEP02649 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 TRIM64EP-201ENST00000531233 1307 ntBASIC7.61□□□□□ -1.19
APOEP02649 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
APOEP02649 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
APOEP02649 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
APOEP02649 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 TYMSP1-201ENST00000407851 869 ntBASIC7.61□□□□□ -1.19
APOEP02649 AC127537.1-201ENST00000418183 748 ntBASIC7.61□□□□□ -1.19
APOEP02649 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
APOEP02649 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC7.61□□□□□ -1.19
APOEP02649 AL593856.1-201ENST00000419949 805 ntBASIC7.61□□□□□ -1.19
APOEP02649 OR7E117P-201ENST00000422682 1112 ntBASIC7.61□□□□□ -1.19
APOEP02649 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC7.61□□□□□ -1.19
APOEP02649 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.61□□□□□ -1.19
APOEP02649 PMS2P11-201ENST00000451831 574 ntBASIC7.61□□□□□ -1.19
APOEP02649 NDUFB4P1-201ENST00000462398 381 ntBASIC7.61□□□□□ -1.19
APOEP02649 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.61□□□□□ -1.19
APOEP02649 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC7.61□□□□□ -1.19
APOEP02649 RN7SKP242-201ENST00000515967 289 ntBASIC7.61□□□□□ -1.19
APOEP02649 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.61□□□□□ -1.19
APOEP02649 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.61□□□□□ -1.19
APOEP02649 ATP5J2P4-201ENST00000538774 267 ntBASIC7.61□□□□□ -1.19
APOEP02649 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC7.61□□□□□ -1.19
APOEP02649 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.61□□□□□ -1.19
APOEP02649 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.61□□□□□ -1.19
APOEP02649 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC7.61□□□□□ -1.19
APOEP02649 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC7.61□□□□□ -1.19
APOEP02649 AL589765.5-201ENST00000596133 515 ntBASIC7.61□□□□□ -1.19
APOEP02649 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.61□□□□□ -1.19
APOEP02649 AL035417.2-201ENST00000603887 796 ntBASIC7.61□□□□□ -1.19
APOEP02649 AL121809.2-201ENST00000613169 341 ntBASIC7.61□□□□□ -1.19
APOEP02649 AC098590.2-201ENST00000614787 281 ntBASIC7.61□□□□□ -1.19
APOEP02649 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.61□□□□□ -1.19
APOEP02649 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC7.61□□□□□ -1.19
APOEP02649 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC7.61□□□□□ -1.19
APOEP02649 FKBP1AP4-201ENST00000631775 336 ntBASIC7.61□□□□□ -1.19
APOEP02649 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.61□□□□□ -1.19
APOEP02649 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
APOEP02649 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
APOEP02649 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
APOEP02649 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.61□□□□□ -1.19
APOEP02649 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.61□□□□□ -1.19
APOEP02649 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.61□□□□□ -1.19
APOEP02649 AL133320.1-201ENST00000621423 2352 ntBASIC7.61□□□□□ -1.19
APOEP02649 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
APOEP02649 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
APOEP02649 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.6□□□□□ -1.19
APOEP02649 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
APOEP02649 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 AC133552.3-201ENST00000572236 1869 ntBASIC7.6□□□□□ -1.19
APOEP02649 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 AC061975.7-201ENST00000592016 2692 ntBASIC7.6□□□□□ -1.19
APOEP02649 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 BX322650.1-201ENST00000332359 2143 ntBASIC7.6□□□□□ -1.19
APOEP02649 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
APOEP02649 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
APOEP02649 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
APOEP02649 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 AC073900.1-201ENST00000429766 776 ntBASIC7.6□□□□□ -1.19
APOEP02649 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC7.6□□□□□ -1.19
APOEP02649 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.6□□□□□ -1.19
APOEP02649 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
APOEP02649 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms