Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 PGAM4P2-201ENST00000512491 721 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AC126177.6-201ENST00000550420 1009 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AC104184.1-201ENST00000607513 721 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AC004943.1-203ENST00000624370 1074 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 LPAL2-203ENST00000454031 2498 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AL008638.3-201ENST00000623027 5182 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 MROH3P-201ENST00000435735 2676 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC008171.1-201ENST00000395058 200 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AL157698.1-201ENST00000415190 1011 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 CEACAMP5-201ENST00000448037 961 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 GAPDHP16-201ENST00000448152 962 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AL034399.1-201ENST00000451535 380 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC093799.1-201ENST00000452411 499 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC135721.2-201ENST00000464237 300 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC008620.1-201ENST00000468453 592 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 LINC01085-203ENST00000511195 326 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC133569.1-201ENST00000564327 373 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC243312.1-201ENST00000570582 275 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 MIR4470-201ENST00000583453 72 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 NDUFA3P1-201ENST00000588007 252 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC097376.1-201ENST00000602907 997 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC018558.4-201ENST00000622153 281 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AP000842.4-201ENST00000638781 748 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC011592.1-201ENST00000624647 3634 ntBASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RSPO3Q9BXY4 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.55□□□□□ -1.36
RSPO3Q9BXY4 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 241.8 ms