Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 OR4F8P-201ENST00000589943 937 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX3Q99909 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC6.28□□□□□ -1.4
SSX3Q99909 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.28□□□□□ -1.4
SSX3Q99909 AC139792.1-201ENST00000607051 647 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 AP003068.4-201ENST00000623192 802 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX3Q99909 OR2A3P-202ENST00000641249 1776 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX3Q99909 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX3Q99909 RBM5-AS1-201ENST00000630404 1386 ntBASIC6.28□□□□□ -1.4
SSX3Q99909 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SSX3Q99909 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX3Q99909 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX3Q99909 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.4
SSX3Q99909 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.4
SSX3Q99909 AC138915.4-201ENST00000565549 4147 ntBASIC6.27□□□□□ -1.4
SSX3Q99909 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX3Q99909 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX3Q99909 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSX3Q99909 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX3Q99909 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSX3Q99909 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSX3Q99909 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX3Q99909 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX3Q99909 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SSX3Q99909 SNORA10B-201ENST00000384458 133 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SSX3Q99909 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 H2AFZP3-201ENST00000394213 387 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX3Q99909 NPM1P38-201ENST00000403835 865 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX3Q99909 YWHAZP3-201ENST00000415292 738 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX3Q99909 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX3Q99909 RN7SL19P-201ENST00000462522 306 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC6.27□□□□□ -1.41
SSX3Q99909 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX3Q99909 AC026700.1-201ENST00000512074 544 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX3Q99909 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX3Q99909 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSX3Q99909 AP000619.1-201ENST00000540293 1000 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX3Q99909 HIGD1AP9-201ENST00000550710 279 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX3Q99909 OR11J5P-201ENST00000556889 934 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX3Q99909 MIR3137-201ENST00000577367 75 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX3Q99909 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX3Q99909 RN7SL237P-201ENST00000580912 287 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX3Q99909 AC025162.2-201ENST00000619602 560 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 AC087072.2-201ENST00000621060 682 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
SSX3Q99909 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX3Q99909 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX3Q99909 AC010653.3-201ENST00000635332 232 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 AC016582.3-206ENST00000636547 207 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSX3Q99909 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX3Q99909 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX3Q99909 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SSX3Q99909 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSX3Q99909 AC074198.1-201ENST00000506546 1397 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX3Q99909 AC010168.2-201ENST00000562691 5428 ntBASIC6.27□□□□□ -1.41
SSX3Q99909 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SSX3Q99909 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX3Q99909 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms