Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 OR51A10P-201ENST00000307165 937 ntBASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 ZNF736P10Y-201ENST00000403990 1110 ntBASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 RPL5P27-201ENST00000437011 881 ntBASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 RPS3AP53-201ENST00000454716 778 ntBASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 RN7SL251P-201ENST00000464175 297 ntBASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AC010409.2-201ENST00000505780 478 ntBASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 OSTC-204ENST00000512478 663 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 OR5F2P-201ENST00000532761 941 ntBASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AL390882.1-201ENST00000618821 594 ntBASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 uc_338.37-201ENST00000620113 186 ntBASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AP000770.2-201ENST00000623694 100 ntBASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AC025040.2-201ENST00000558657 1852 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 SLC25A5P7-201ENST00000406156 896 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 TYMSP1-201ENST00000407851 869 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 RN7SKP117-201ENST00000410175 264 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AC084878.1-201ENST00000480555 648 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 RNA5SP75-201ENST00000516841 111 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 RN7SL657P-201ENST00000582431 293 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AC061975.3-201ENST00000583209 244 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AL589765.5-201ENST00000596133 515 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AC099667.1-201ENST00000624222 469 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AC106858.1-201ENST00000637497 429 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AL136298.2-201ENST00000556497 1570 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP1Q96SZ6 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP1Q96SZ6 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms