Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 AC005519.1-201ENST00000554490 601 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 AC005828.7-201ENST00000607331 556 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 AP005329.3-201ENST00000609924 686 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 MIR6778-201ENST00000617912 73 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 ARHGAP42P5-201ENST00000548856 2936 ntBASIC8.62□□□□□ -1.03
SNED1Q8TER0 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 AC026464.2-201ENST00000567834 2421 ntBASIC8.62□□□□□ -1.03
SNED1Q8TER0 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 AL133320.1-201ENST00000621423 2352 ntBASIC8.62□□□□□ -1.03
SNED1Q8TER0 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 STAG3L4-201ENST00000352103 530 ntBASIC8.62□□□□□ -1.03
SNED1Q8TER0 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 RNA5SP155-201ENST00000411154 129 ntBASIC8.62□□□□□ -1.03
SNED1Q8TER0 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 AC018797.1-201ENST00000510791 255 ntBASIC8.62□□□□□ -1.03
SNED1Q8TER0 AC093816.1-201ENST00000515076 913 ntBASIC8.62□□□□□ -1.03
SNED1Q8TER0 RN7SKP196-201ENST00000516267 345 ntBASIC8.62□□□□□ -1.03
SNED1Q8TER0 IGLVV-66-201ENST00000523818 341 ntBASIC8.62□□□□□ -1.03
SNED1Q8TER0 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 MIR378C-201ENST00000578683 81 ntBASIC8.62□□□□□ -1.03
SNED1Q8TER0 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.62□□□□□ -1.03
SNED1Q8TER0 AC005858.3-201ENST00000624756 589 ntBASIC8.62□□□□□ -1.03
SNED1Q8TER0 NF1P8-201ENST00000415351 1461 ntBASIC8.62□□□□□ -1.03
SNED1Q8TER0 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNED1Q8TER0 MAPK10-357ENST00000641831 2858 ntBASIC8.61□□□□□ -1.03
SNED1Q8TER0 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNED1Q8TER0 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 AL096816.1-201ENST00000623300 2920 ntBASIC8.61□□□□□ -1.03
SNED1Q8TER0 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNED1Q8TER0 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNED1Q8TER0 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SNED1Q8TER0 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SNED1Q8TER0 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SNED1Q8TER0 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SNED1Q8TER0 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNED1Q8TER0 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SNED1Q8TER0 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SNED1Q8TER0 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SNED1Q8TER0 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 AL359885.1-201ENST00000415786 903 ntBASIC8.61□□□□□ -1.03
SNED1Q8TER0 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 RPSAP40-201ENST00000442343 891 ntBASIC8.61□□□□□ -1.03
SNED1Q8TER0 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.61□□□□□ -1.03
SNED1Q8TER0 AL390728.3-201ENST00000452704 270 ntBASIC8.61□□□□□ -1.03
SNED1Q8TER0 AC026336.1-201ENST00000466577 351 ntBASIC8.61□□□□□ -1.03
SNED1Q8TER0 RN7SL390P-201ENST00000470634 284 ntBASIC8.61□□□□□ -1.03
SNED1Q8TER0 IGLC4-201ENST00000517690 248 ntBASIC8.61□□□□□ -1.03
SNED1Q8TER0 IGHVIII-26-1-201ENST00000520387 250 ntBASIC8.61□□□□□ -1.03
SNED1Q8TER0 AC098590.2-201ENST00000614787 281 ntBASIC8.61□□□□□ -1.03
SNED1Q8TER0 AC012676.3-201ENST00000614983 479 ntBASIC8.61□□□□□ -1.03
SNED1Q8TER0 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.61□□□□□ -1.03
SNED1Q8TER0 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SNED1Q8TER0 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNED1Q8TER0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
SNED1Q8TER0 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNED1Q8TER0 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SNED1Q8TER0 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms