Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 AC245128.3-201ENST00000594721 748 ntBASIC6.84□□□□□ -1.31
SNX18Q96RF0 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 AL451085.1-201ENST00000604546 690 ntBASIC6.84□□□□□ -1.31
SNX18Q96RF0 MARK3P1-201ENST00000604796 643 ntBASIC6.84□□□□□ -1.31
SNX18Q96RF0 BNIP3P7-201ENST00000605641 516 ntBASIC6.84□□□□□ -1.31
SNX18Q96RF0 AL096855.2-201ENST00000605785 369 ntBASIC6.84□□□□□ -1.31
SNX18Q96RF0 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC6.84□□□□□ -1.31
SNX18Q96RF0 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 MIR6726-201ENST00000613751 61 ntBASIC6.84□□□□□ -1.31
SNX18Q96RF0 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 AC091544.5-201ENST00000620192 3815 ntBASIC6.84□□□□□ -1.31
SNX18Q96RF0 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 AC104820.1-201ENST00000624183 307 ntBASIC6.84□□□□□ -1.31
SNX18Q96RF0 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SNX18Q96RF0 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SNX18Q96RF0 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.84□□□□□ -1.31
SNX18Q96RF0 AC090132.1-201ENST00000524071 1480 ntBASIC6.84□□□□□ -1.31
SNX18Q96RF0 MFSD8-243ENST00000641695 1455 ntBASIC6.84□□□□□ -1.31
SNX18Q96RF0 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SNX18Q96RF0 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.84□□□□□ -1.31
SNX18Q96RF0 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.32
SNX18Q96RF0 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
SNX18Q96RF0 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.84□□□□□ -1.32
SNX18Q96RF0 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.84□□□□□ -1.32
SNX18Q96RF0 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
SNX18Q96RF0 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
SNX18Q96RF0 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SNX18Q96RF0 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.32
SNX18Q96RF0 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 MIR555-201ENST00000384987 96 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 PHBP1-201ENST00000392260 808 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 AL353151.1-201ENST00000402406 604 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 AL136116.2-201ENST00000404020 785 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 VN1R35P-201ENST00000428102 693 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 AL354893.1-201ENST00000433735 348 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 ENTPD1-AS1-206ENST00000449197 523 ntTSL 2 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 RN7SL563P-201ENST00000481233 298 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 AC113352.1-201ENST00000513196 666 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 RN7SKP14-201ENST00000516000 329 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 AC005518.2-201ENST00000603254 282 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 RPL23AP90-201ENST00000603820 236 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 AC013731.1-201ENST00000604340 883 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 CYCSP1-201ENST00000604815 315 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 AL590560.2-201ENST00000608430 732 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 AP005131.7-201ENST00000610087 611 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 MIR6723-201ENST00000621981 89 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 CYP2G2P-201ENST00000594920 1485 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms